Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm22372-201ENSMUST00000104589 136 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Mir466f-4-201ENSMUST00000116930 121 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm11408-201ENSMUST00000117889 519 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm15025-201ENSMUST00000118434 418 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm3943-201ENSMUST00000118606 718 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm6797-201ENSMUST00000119440 512 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm12303-201ENSMUST00000119506 673 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm14240-201ENSMUST00000120353 546 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm26354-201ENSMUST00000158221 129 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm20656-201ENSMUST00000176925 518 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm29045-201ENSMUST00000187278 698 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Igkv4-75-201ENSMUST00000197204 359 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm43804-201ENSMUST00000198280 456 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm44360-201ENSMUST00000200081 82 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm29793-201ENSMUST00000202874 460 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm17988-201ENSMUST00000208796 535 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 LOC665443-201ENSMUST00000212284 796 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 AC153141.1-201ENSMUST00000218636 501 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 AC154846.2-201ENSMUST00000228805 424 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Mir298-201ENSMUST00000083476 82 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.72□□□□□ -1.65
Pcdh1F7BJK1 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Pcdh1F7BJK1 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm14086-201ENSMUST00000117152 173 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm12820-201ENSMUST00000119233 342 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm5060-201ENSMUST00000120072 599 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm13677-201ENSMUST00000120739 595 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm11363-201ENSMUST00000121672 548 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm15959-201ENSMUST00000121724 368 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm25459-201ENSMUST00000157953 114 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm23760-201ENSMUST00000158350 116 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm25445-201ENSMUST00000158996 299 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Mir6973b-201ENSMUST00000184185 80 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm4557-201ENSMUST00000185826 907 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm4526-201ENSMUST00000186039 920 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm8708-201ENSMUST00000188500 906 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm37586-201ENSMUST00000193654 204 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm8874-201ENSMUST00000196826 286 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Mir409-201ENSMUST00000198153 79 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm43710-201ENSMUST00000199583 452 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm44055-201ENSMUST00000204376 247 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm44472-201ENSMUST00000204922 943 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Gm17990-201ENSMUST00000211728 553 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 AC156950.1-201ENSMUST00000219604 456 ntBASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Pcdh1F7BJK1 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms