Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Gm14142-201ENSMUST00000117833 296 ntBASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Gm11746-201ENSMUST00000119843 821 ntBASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Gm25037-201ENSMUST00000175418 110 ntBASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Gm13692-201ENSMUST00000120774 371 ntBASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Gm28625-201ENSMUST00000188309 205 ntBASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Gm44371-201ENSMUST00000204148 467 ntBASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a3E9PWQ3 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Gm25528-201ENSMUST00000180264 132 ntBASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Gm26585-201ENSMUST00000180890 630 ntBASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Gm37433-201ENSMUST00000192695 678 ntBASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Gm37441-201ENSMUST00000194430 678 ntBASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Mir3087-201ENSMUST00000199405 56 ntBASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Gm18306-201ENSMUST00000207338 569 ntBASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Mir215-201ENSMUST00000083628 112 ntBASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col6a3E9PWQ3 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Mrgprb13-201ENSMUST00000188191 985 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm13615-201ENSMUST00000120242 1612 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm9850-201ENSMUST00000117916 227 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm24177-201ENSMUST00000158927 131 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm42428-201ENSMUST00000198677 302 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm6230-201ENSMUST00000208077 780 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 AC161256.1-201ENSMUST00000217312 213 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm26494-201ENSMUST00000083154 143 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm24493-201ENSMUST00000083805 143 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm37930-201ENSMUST00000194308 1886 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm15166-201ENSMUST00000120790 385 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm23289-201ENSMUST00000175615 108 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm37575-201ENSMUST00000195467 309 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm38088-201ENSMUST00000195829 241 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm18719-201ENSMUST00000196696 1413 ntBASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col6a3E9PWQ3 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.24□□□□□ -1.89
Col6a3E9PWQ3 Gm42549-201ENSMUST00000202392 7004 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 109.8 ms