Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Scn8aQ9WTU3 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Scn8aQ9WTU3 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.4□□□□□ -1.86
Scn8aQ9WTU3 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.4□□□□□ -1.86
Scn8aQ9WTU3 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Scn8aQ9WTU3 Gm24520-201ENSMUST00000179510 110 ntBASIC3.4□□□□□ -1.86
Scn8aQ9WTU3 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.4□□□□□ -1.86
Scn8aQ9WTU3 Gm27538-201ENSMUST00000185065 294 ntBASIC3.4□□□□□ -1.86
Scn8aQ9WTU3 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.4□□□□□ -1.86
Scn8aQ9WTU3 Gm37996-201ENSMUST00000191859 367 ntBASIC3.4□□□□□ -1.86
Scn8aQ9WTU3 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Scn8aQ9WTU3 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC3.4□□□□□ -1.86
Scn8aQ9WTU3 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Scn8aQ9WTU3 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Scn8aQ9WTU3 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Scn8aQ9WTU3 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Gm23609-201ENSMUST00000104542 127 ntBASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Gm16563-201ENSMUST00000162673 423 ntBASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Gm6245-201ENSMUST00000164699 768 ntBASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Gm4479-201ENSMUST00000178807 171 ntBASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Gm26993-201ENSMUST00000182766 789 ntBASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Mir6398-201ENSMUST00000184541 102 ntBASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Gm2427-201ENSMUST00000189121 881 ntBASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Gm42621-201ENSMUST00000198114 275 ntBASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Gm45259-201ENSMUST00000209217 1006 ntBASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Gm4057-201ENSMUST00000221407 368 ntBASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Scn8aQ9WTU3 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Gm37588-201ENSMUST00000195024 2496 ntBASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Gm13122-201ENSMUST00000118380 453 ntBASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Gm12387-201ENSMUST00000118573 955 ntBASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Gm17060-201ENSMUST00000172394 824 ntBASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Scn8aQ9WTU3 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Gm23855-201ENSMUST00000158377 135 ntBASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Gm43227-201ENSMUST00000202239 677 ntBASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Gm25581-201ENSMUST00000083410 164 ntBASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Gm12090-201ENSMUST00000118692 758 ntBASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Gm28785-201ENSMUST00000187478 379 ntBASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Gm35405-201ENSMUST00000218754 400 ntBASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Gm23297-201ENSMUST00000083184 127 ntBASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.38□□□□□ -1.87
Scn8aQ9WTU3 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 Gm29104-201ENSMUST00000186304 222 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms