Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm5379-201ENSMUST00000120973 826 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm24592-201ENSMUST00000122505 106 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm25433-201ENSMUST00000158283 286 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm28141-201ENSMUST00000186676 342 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm6137-201ENSMUST00000187552 578 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm28061-201ENSMUST00000189085 807 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm8242-202ENSMUST00000193056 475 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm17775-201ENSMUST00000198542 258 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm44023-201ENSMUST00000203710 469 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm5876-201ENSMUST00000203735 243 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 AC153800.1-201ENSMUST00000219212 365 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm36501-201ENSMUST00000221857 745 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm22020-201ENSMUST00000104358 136 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm26143-201ENSMUST00000104480 108 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm15206-201ENSMUST00000119143 454 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm26034-201ENSMUST00000158154 116 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Mir5103-201ENSMUST00000175111 79 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Mir5127-201ENSMUST00000175295 71 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm25944-201ENSMUST00000178758 94 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm37098-201ENSMUST00000192290 244 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm19244-201ENSMUST00000204340 253 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm34272-201ENSMUST00000208886 253 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm9616-201ENSMUST00000221154 781 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm6049-201ENSMUST00000222369 458 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Zfp850-201ENSMUST00000099111 941 ntBASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trem1Q9JKE2 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Gm15126-201ENSMUST00000118631 833 ntBASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.48□□□□□ -1.85
Trem1Q9JKE2 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Gm26320-201ENSMUST00000157742 306 ntBASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Gm22156-201ENSMUST00000158409 141 ntBASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Gm25906-201ENSMUST00000158489 126 ntBASIC3.48□□□□□ -1.85
Trem1Q9JKE2 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Gm24417-201ENSMUST00000178123 79 ntBASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Gm24653-201ENSMUST00000178541 79 ntBASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Gm25934-201ENSMUST00000178642 79 ntBASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Mir7674-201ENSMUST00000184964 63 ntBASIC3.48□□□□□ -1.85
Trem1Q9JKE2 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC3.48□□□□□ -1.85
Trem1Q9JKE2 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Gm43198-201ENSMUST00000200927 326 ntBASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 AC151843.1-201ENSMUST00000215960 691 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms