Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm22639-201ENSMUST00000175591 125 ntBASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Gm24979-201ENSMUST00000178626 126 ntBASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Gm27743-201ENSMUST00000185136 126 ntBASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Gm19637-201ENSMUST00000185933 579 ntBASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Gm2189-201ENSMUST00000201419 429 ntBASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Rpa3Q9CQ71 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Rpa3Q9CQ71 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
Rpa3Q9CQ71 Gm43443-201ENSMUST00000202337 2393 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm14811-201ENSMUST00000117070 117 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm22059-201ENSMUST00000157544 104 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm23585-201ENSMUST00000157656 102 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm4207-201ENSMUST00000173144 960 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Spin2g-201ENSMUST00000178425 687 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm28872-201ENSMUST00000191518 158 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm38098-201ENSMUST00000194115 241 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm45245-201ENSMUST00000210082 376 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm35405-201ENSMUST00000218754 400 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm18116-201ENSMUST00000220920 537 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm26226-201ENSMUST00000082509 116 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm23736-201ENSMUST00000082553 75 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Snora70-201ENSMUST00000083047 137 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm25630-201ENSMUST00000084000 162 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.65□□□□□ -1.83
Rpa3Q9CQ71 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm24987-201ENSMUST00000104453 134 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm13167-201ENSMUST00000118554 578 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm22320-201ENSMUST00000157149 312 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm26187-201ENSMUST00000157693 101 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm26001-201ENSMUST00000157989 103 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm23633-201ENSMUST00000175293 119 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Mir6907-201ENSMUST00000183764 71 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm36997-201ENSMUST00000195090 707 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm42526-201ENSMUST00000198956 393 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm8785-201ENSMUST00000220259 487 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 AC158536.1-201ENSMUST00000222510 256 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm3565-201ENSMUST00000222670 609 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm25592-201ENSMUST00000082635 131 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Rpa3Q9CQ71 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms