Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm37455-201ENSMUST00000191993 529 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Mir409-201ENSMUST00000198153 79 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm43968-201ENSMUST00000203388 389 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm44609-201ENSMUST00000207157 460 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.81□□□□□ -1.48
Clp1Q99LI9 AC132437.1-201ENSMUST00000218308 320 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm25139-201ENSMUST00000083247 210 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Clp1Q99LI9 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Clp1Q99LI9 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clp1Q99LI9 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Clp1Q99LI9 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Clp1Q99LI9 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clp1Q99LI9 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clp1Q99LI9 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clp1Q99LI9 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Clp1Q99LI9 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clp1Q99LI9 Gm24608-201ENSMUST00000104381 136 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 Gm11221-201ENSMUST00000117230 597 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 Gm14897-201ENSMUST00000118213 207 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 Gm6062-201ENSMUST00000120462 631 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC5.8□□□□□ -1.48
Clp1Q99LI9 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 Gm8941-201ENSMUST00000181451 899 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.8□□□□□ -1.48
Clp1Q99LI9 Gm29229-201ENSMUST00000188874 323 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC5.8□□□□□ -1.48
Clp1Q99LI9 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clp1Q99LI9 Gm37503-201ENSMUST00000192088 319 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.8□□□□□ -1.48
Clp1Q99LI9 Gm43408-201ENSMUST00000198263 440 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 AC164567.2-201ENSMUST00000219363 445 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 AC166358.7-201ENSMUST00000221132 108 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 AC125543.5-201ENSMUST00000222799 108 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC5.8□□□□□ -1.48
Clp1Q99LI9 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Clp1Q99LI9 AC123656.2-201ENSMUST00000226726 227 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 AC118639.1-201ENSMUST00000227204 338 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 AC098719.1-201ENSMUST00000228920 371 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clp1Q99LI9 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.8□□□□□ -1.48
Clp1Q99LI9 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Clp1Q99LI9 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.8□□□□□ -1.48
Clp1Q99LI9 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Clp1Q99LI9 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Clp1Q99LI9 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clp1Q99LI9 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clp1Q99LI9 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
Clp1Q99LI9 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
Clp1Q99LI9 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clp1Q99LI9 Mir667-201ENSMUST00000102441 92 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm11912-201ENSMUST00000117235 264 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm11270-201ENSMUST00000117685 471 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm12852-201ENSMUST00000119478 719 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm15364-201ENSMUST00000119618 585 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm14638-201ENSMUST00000121338 216 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm23068-201ENSMUST00000158239 293 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm25655-201ENSMUST00000158465 290 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm23700-201ENSMUST00000158842 102 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm23191-201ENSMUST00000179147 107 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm4845-201ENSMUST00000179202 562 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm26866-201ENSMUST00000180414 802 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm27385-201ENSMUST00000184747 104 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm28552-201ENSMUST00000190725 388 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.79□□□□□ -1.48
Clp1Q99LI9 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clp1Q99LI9 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clp1Q99LI9 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm45735-201ENSMUST00000212779 319 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm46193-201ENSMUST00000219399 364 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC5.79□□□□□ -1.48
Clp1Q99LI9 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 CT485612.2-201ENSMUST00000223014 151 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Gm23848-201ENSMUST00000083826 106 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clp1Q99LI9 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.79□□□□□ -1.48
Clp1Q99LI9 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Clp1Q99LI9 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Clp1Q99LI9 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clp1Q99LI9 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clp1Q99LI9 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Clp1Q99LI9 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms