Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Col6a6Q8C6K9 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
Col6a6Q8C6K9 Gm5392-201ENSMUST00000122189 789 ntBASIC2.95□□□□□ -1.94
Col6a6Q8C6K9 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Col6a6Q8C6K9 Gm9379-201ENSMUST00000196790 646 ntBASIC2.95□□□□□ -1.94
Col6a6Q8C6K9 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC2.95□□□□□ -1.94
Col6a6Q8C6K9 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC2.95□□□□□ -1.94
Col6a6Q8C6K9 AC121966.1-201ENSMUST00000221458 282 ntBASIC2.95□□□□□ -1.94
Col6a6Q8C6K9 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Col6a6Q8C6K9 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Col6a6Q8C6K9 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Col6a6Q8C6K9 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Col6a6Q8C6K9 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Col6a6Q8C6K9 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm9435-201ENSMUST00000120379 877 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm23257-201ENSMUST00000158322 132 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm17075-201ENSMUST00000171924 670 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm28030-201ENSMUST00000184987 138 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm23615-201ENSMUST00000082602 65 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Snord7-201ENSMUST00000083781 97 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm43594-201ENSMUST00000201153 3442 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm37488-201ENSMUST00000195434 3374 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm38375-201ENSMUST00000194610 2227 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm37393-201ENSMUST00000195118 3870 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm11923-201ENSMUST00000118135 508 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm12858-201ENSMUST00000121913 208 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm11349-201ENSMUST00000122209 1116 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm15795-201ENSMUST00000160969 553 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm26061-201ENSMUST00000175584 108 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Gm44869-201ENSMUST00000208836 357 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 AC157572.3-201ENSMUST00000227288 303 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 AC126033.1-201ENSMUST00000227628 6773 ntBASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col6a6Q8C6K9 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm28362-201ENSMUST00000189430 2420 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Svet1-201ENSMUST00000209370 3940 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm37298-201ENSMUST00000193770 3868 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm12677-201ENSMUST00000118668 426 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm14926-201ENSMUST00000120650 508 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm5123-201ENSMUST00000121905 837 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Klra11-ps-201ENSMUST00000122033 810 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm23791-201ENSMUST00000122553 293 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm5755-201ENSMUST00000152394 837 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm17421-201ENSMUST00000167845 674 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm44253-201ENSMUST00000203387 628 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 AC099578.1-201ENSMUST00000220147 435 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm17820-201ENSMUST00000220213 1068 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm23668-201ENSMUST00000157465 111 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm16566-201ENSMUST00000160387 910 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Mir6413-201ENSMUST00000184049 108 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm18602-201ENSMUST00000209794 851 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm8423-201ENSMUST00000211387 607 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 AC154618.1-201ENSMUST00000227451 303 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 AC117588.3-201ENSMUST00000228517 325 ntBASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col6a6Q8C6K9 Gm45066-201ENSMUST00000207528 2551 ntBASIC2.92□□□□□ -1.94
Col6a6Q8C6K9 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col6a6Q8C6K9 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col6a6Q8C6K9 AC155830.1-201ENSMUST00000220050 3836 ntBASIC2.92□□□□□ -1.94
Col6a6Q8C6K9 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col6a6Q8C6K9 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col6a6Q8C6K9 Gm12261-201ENSMUST00000117499 645 ntBASIC2.92□□□□□ -1.94
Col6a6Q8C6K9 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC2.92□□□□□ -1.94
Col6a6Q8C6K9 Gm11448-201ENSMUST00000120427 450 ntBASIC2.92□□□□□ -1.94
Col6a6Q8C6K9 n-R5s45-201ENSMUST00000122592 110 ntBASIC2.92□□□□□ -1.94
Col6a6Q8C6K9 Gm26041-201ENSMUST00000158148 108 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms