Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm22882-201ENSMUST00000157749 124 ntBASIC7.11□□□□□ -1.27
Trim35Q8C006 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim35Q8C006 Gm22702-201ENSMUST00000175372 69 ntBASIC7.11□□□□□ -1.27
Trim35Q8C006 Trbv9-201ENSMUST00000194494 290 ntBASIC7.11□□□□□ -1.27
Trim35Q8C006 Gm18427-201ENSMUST00000195422 515 ntBASIC7.11□□□□□ -1.27
Trim35Q8C006 Gm43220-201ENSMUST00000199299 282 ntBASIC7.11□□□□□ -1.27
Trim35Q8C006 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC7.11□□□□□ -1.27
Trim35Q8C006 Glud-ps-201ENSMUST00000206310 657 ntBASIC7.11□□□□□ -1.27
Trim35Q8C006 AC134537.2-201ENSMUST00000217770 575 ntBASIC7.11□□□□□ -1.27
Trim35Q8C006 Mir133a-1-201ENSMUST00000083465 68 ntBASIC7.11□□□□□ -1.27
Trim35Q8C006 Gm25006-201ENSMUST00000083813 107 ntBASIC7.11□□□□□ -1.27
Trim35Q8C006 Gm25189-201ENSMUST00000083911 164 ntBASIC7.11□□□□□ -1.27
Trim35Q8C006 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
Trim35Q8C006 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim35Q8C006 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim35Q8C006 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim35Q8C006 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim35Q8C006 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim35Q8C006 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim35Q8C006 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim35Q8C006 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim35Q8C006 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim35Q8C006 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Trim35Q8C006 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim35Q8C006 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim35Q8C006 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Trim35Q8C006 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Trim35Q8C006 Gm43188-201ENSMUST00000200180 2160 ntBASIC7.1□□□□□ -1.27
Trim35Q8C006 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim35Q8C006 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.1□□□□□ -1.27
Trim35Q8C006 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Trim35Q8C006 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC7.1□□□□□ -1.27
Trim35Q8C006 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Trim35Q8C006 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim35Q8C006 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Trim35Q8C006 Gm37254-201ENSMUST00000193542 3901 ntBASIC7.1□□□□□ -1.27
Trim35Q8C006 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim35Q8C006 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC7.1□□□□□ -1.27
Trim35Q8C006 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC7.1□□□□□ -1.27
Trim35Q8C006 Gm12442-201ENSMUST00000118372 338 ntBASIC7.1□□□□□ -1.27
Trim35Q8C006 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC7.1□□□□□ -1.27
Trim35Q8C006 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim35Q8C006 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim35Q8C006 Gm25883-201ENSMUST00000157781 271 ntBASIC7.1□□□□□ -1.27
Trim35Q8C006 Gm24057-201ENSMUST00000158616 302 ntBASIC7.1□□□□□ -1.27
Trim35Q8C006 Gm20534-201ENSMUST00000172957 172 ntBASIC7.1□□□□□ -1.27
Trim35Q8C006 Gm22917-201ENSMUST00000180116 110 ntBASIC7.1□□□□□ -1.27
Trim35Q8C006 Mir6769b-201ENSMUST00000184793 60 ntBASIC7.1□□□□□ -1.27
Trim35Q8C006 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC7.1□□□□□ -1.27
Trim35Q8C006 Gm32536-201ENSMUST00000205209 445 ntBASIC7.1□□□□□ -1.27
Trim35Q8C006 AC105958.2-201ENSMUST00000214167 191 ntBASIC7.1□□□□□ -1.27
Trim35Q8C006 AC123803.1-201ENSMUST00000216093 189 ntBASIC7.1□□□□□ -1.27
Trim35Q8C006 Gm33312-201ENSMUST00000222443 332 ntBASIC7.1□□□□□ -1.27
Trim35Q8C006 n-R5s60-201ENSMUST00000083299 119 ntBASIC7.1□□□□□ -1.27
Trim35Q8C006 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim35Q8C006 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.1□□□□□ -1.27
Trim35Q8C006 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim35Q8C006 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim35Q8C006 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim35Q8C006 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim35Q8C006 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim35Q8C006 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim35Q8C006 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim35Q8C006 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim35Q8C006 Gm5084-202ENSMUST00000224064 3609 ntBASIC7.09□□□□□ -1.27
Trim35Q8C006 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim35Q8C006 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim35Q8C006 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim35Q8C006 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim35Q8C006 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim35Q8C006 Gm37551-201ENSMUST00000195556 2861 ntBASIC7.09□□□□□ -1.27
Trim35Q8C006 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim35Q8C006 Gm24276-201ENSMUST00000102181 110 ntBASIC7.09□□□□□ -1.27
Trim35Q8C006 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Trim35Q8C006 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Trim35Q8C006 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.09□□□□□ -1.27
Trim35Q8C006 Gm23788-201ENSMUST00000122535 106 ntBASIC7.09□□□□□ -1.27
Trim35Q8C006 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC7.09□□□□□ -1.27
Trim35Q8C006 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim35Q8C006 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim35Q8C006 Gm11962-201ENSMUST00000145746 255 ntBASIC7.09□□□□□ -1.27
Trim35Q8C006 Ighv1-32-201ENSMUST00000195149 351 ntBASIC7.09□□□□□ -1.27
Trim35Q8C006 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim35Q8C006 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim35Q8C006 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim35Q8C006 AC138401.1-201ENSMUST00000221533 116 ntBASIC7.09□□□□□ -1.27
Trim35Q8C006 Gm25630-201ENSMUST00000084000 162 ntBASIC7.09□□□□□ -1.27
Trim35Q8C006 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim35Q8C006 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim35Q8C006 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim35Q8C006 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim35Q8C006 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
Trim35Q8C006 AC141476.1-201ENSMUST00000224988 3387 ntBASIC7.09□□□□□ -1.27
Trim35Q8C006 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim35Q8C006 Klf5-202ENSMUST00000226784 2852 ntBASIC7.09□□□□□ -1.27
Trim35Q8C006 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim35Q8C006 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim35Q8C006 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
Trim35Q8C006 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.28
Trim35Q8C006 Gm37773-201ENSMUST00000194141 2120 ntBASIC7.09□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms