Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm45211-201ENSMUST00000206208 2650 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm26384-201ENSMUST00000102183 110 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm12719-201ENSMUST00000118859 241 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm26271-201ENSMUST00000158349 104 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm23352-201ENSMUST00000158428 64 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm6395-201ENSMUST00000167639 691 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm7094-201ENSMUST00000178379 366 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm27796-201ENSMUST00000183863 261 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Mir7093-201ENSMUST00000184195 101 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm43710-201ENSMUST00000199583 452 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm44990-201ENSMUST00000203922 217 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm17811-201ENSMUST00000206193 387 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 CT485612.3-201ENSMUST00000222179 408 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm23614-201ENSMUST00000082598 107 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Mir26a-2-201ENSMUST00000083496 84 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm10540-201ENSMUST00000097581 276 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm6757-201ENSMUST00000189810 1706 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm45872-201ENSMUST00000209804 1584 ntBASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Usp40Q8BWR4 Gm37668-201ENSMUST00000193745 1944 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm23481-201ENSMUST00000104173 131 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm15981-201ENSMUST00000119196 457 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm7363-201ENSMUST00000119883 399 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm16331-201ENSMUST00000144274 498 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm22841-201ENSMUST00000158443 62 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm24224-201ENSMUST00000158828 258 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm17131-201ENSMUST00000164420 3846 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Ear-ps3-201ENSMUST00000168308 445 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm6802-202ENSMUST00000186566 126 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm44385-201ENSMUST00000198781 81 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm8942-201ENSMUST00000217892 400 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 AC160114.1-201ENSMUST00000221930 365 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 AC117237.1-201ENSMUST00000224035 395 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 AL606472.1-201ENSMUST00000224628 275 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 AC151907.1-201ENSMUST00000228812 412 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm25004-201ENSMUST00000083811 161 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm37762-201ENSMUST00000194515 3561 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Gm37397-201ENSMUST00000194579 2842 ntBASIC6.17□□□□□ -1.42
Usp40Q8BWR4 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm11869-201ENSMUST00000118701 329 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Gm11506-201ENSMUST00000122414 470 ntBASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC6.16□□□□□ -1.42
Usp40Q8BWR4 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms