Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC5.9□□□□□ -1.46
Trim56Q80VI1 Gm3148-201ENSMUST00000203594 612 ntBASIC5.9□□□□□ -1.46
Trim56Q80VI1 Supt4b-201ENSMUST00000214434 351 ntBASIC5.9□□□□□ -1.46
Trim56Q80VI1 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.9□□□□□ -1.46
Trim56Q80VI1 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.9□□□□□ -1.46
Trim56Q80VI1 Gm2436-201ENSMUST00000219562 774 ntBASIC5.9□□□□□ -1.46
Trim56Q80VI1 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim56Q80VI1 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim56Q80VI1 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.9□□□□□ -1.46
Trim56Q80VI1 AC154506.1-201ENSMUST00000225178 621 ntBASIC5.9□□□□□ -1.46
Trim56Q80VI1 CT025157.1-201ENSMUST00000226241 292 ntBASIC5.9□□□□□ -1.46
Trim56Q80VI1 Gm22365-201ENSMUST00000093750 117 ntBASIC5.9□□□□□ -1.46
Trim56Q80VI1 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim56Q80VI1 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Trim56Q80VI1 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trim56Q80VI1 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trim56Q80VI1 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trim56Q80VI1 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trim56Q80VI1 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.9□□□□□ -1.47
Trim56Q80VI1 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trim56Q80VI1 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.47
Trim56Q80VI1 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.9□□□□□ -1.47
Trim56Q80VI1 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Trim56Q80VI1 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.9□□□□□ -1.47
Trim56Q80VI1 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.9□□□□□ -1.47
Trim56Q80VI1 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Trim56Q80VI1 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm26376-201ENSMUST00000104784 110 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm11346-201ENSMUST00000118346 704 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm23332-201ENSMUST00000157424 275 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm26490-201ENSMUST00000157879 140 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm17086-201ENSMUST00000171346 484 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm8214-201ENSMUST00000172123 351 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm28976-201ENSMUST00000188070 144 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm10292-202ENSMUST00000193165 585 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm36382-201ENSMUST00000198892 541 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm4501-201ENSMUST00000207330 551 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm4558-201ENSMUST00000207886 521 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm4528-201ENSMUST00000207905 551 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm8423-201ENSMUST00000211387 607 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim56Q80VI1 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim56Q80VI1 AC109172.1-201ENSMUST00000227503 187 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 AC117588.3-201ENSMUST00000228517 325 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim56Q80VI1 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim56Q80VI1 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.89□□□□□ -1.47
Trim56Q80VI1 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.89□□□□□ -1.47
Trim56Q80VI1 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm13331-201ENSMUST00000117500 448 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm12039-201ENSMUST00000118219 180 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm15988-201ENSMUST00000118677 367 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm24371-201ENSMUST00000122662 267 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm22851-201ENSMUST00000178741 94 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm26993-201ENSMUST00000182766 789 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm9569-201ENSMUST00000187492 787 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm33354-201ENSMUST00000195448 906 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Igkv11-114-201ENSMUST00000200013 346 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm44295-201ENSMUST00000203805 437 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gm45146-201ENSMUST00000207108 221 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim56Q80VI1 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Trim56Q80VI1 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.88□□□□□ -1.47
Trim56Q80VI1 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim56Q80VI1 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms