Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm13973-201ENSMUST00000121371 894 ntBASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm24664-201ENSMUST00000158939 100 ntBASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm18358-201ENSMUST00000173179 1277 ntBASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm25412-201ENSMUST00000180258 107 ntBASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm38053-201ENSMUST00000193938 160 ntBASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm43925-201ENSMUST00000203498 206 ntBASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 AC154374.1-201ENSMUST00000215351 351 ntBASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 AC140368.1-202ENSMUST00000226131 658 ntBASIC5.12□□□□□ -1.59
Ddx58Q6Q899 AC121960.3-201ENSMUST00000227077 623 ntBASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Gm38278-201ENSMUST00000194715 1365 ntBASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm37011-201ENSMUST00000195543 2935 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm43886-201ENSMUST00000205039 2386 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Mir676-201ENSMUST00000102443 89 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm12311-201ENSMUST00000118803 374 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm15313-201ENSMUST00000119179 282 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm14463-201ENSMUST00000121117 498 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm14577-201ENSMUST00000121134 256 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm18522-201ENSMUST00000173947 650 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm5473-201ENSMUST00000179326 642 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm23816-201ENSMUST00000179617 132 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm27342-201ENSMUST00000183530 109 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm28267-201ENSMUST00000191093 265 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm29038-201ENSMUST00000191543 678 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm38008-201ENSMUST00000195333 518 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm43491-201ENSMUST00000197133 784 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm35558-202ENSMUST00000221819 499 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 CT009713.4-201ENSMUST00000224246 272 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm25699-201ENSMUST00000082896 167 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm22578-201ENSMUST00000083730 107 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 n-R5s54-201ENSMUST00000083837 112 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm38260-201ENSMUST00000193573 3995 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Gm42534-201ENSMUST00000196063 1754 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 AC173482.1-201ENSMUST00000224494 3815 ntBASIC5.11□□□□□ -1.59
Ddx58Q6Q899 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ddx58Q6Q899 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Ddx58Q6Q899 Gm26474-201ENSMUST00000116762 122 ntBASIC5.1□□□□□ -1.59
Ddx58Q6Q899 Gm14795-201ENSMUST00000118461 471 ntBASIC5.1□□□□□ -1.59
Ddx58Q6Q899 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ddx58Q6Q899 Gm14282-201ENSMUST00000119484 240 ntBASIC5.1□□□□□ -1.59
Ddx58Q6Q899 Gm1866-201ENSMUST00000120701 477 ntBASIC5.1□□□□□ -1.59
Ddx58Q6Q899 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ddx58Q6Q899 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC5.1□□□□□ -1.59
Ddx58Q6Q899 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
Ddx58Q6Q899 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ddx58Q6Q899 Gm20526-201ENSMUST00000173416 158 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms