Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 n-R5s215-201ENSMUST00000082480 104 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm25859-201ENSMUST00000083710 91 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Rnf220Q6PDX6 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm11878-201ENSMUST00000117908 400 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm13064-201ENSMUST00000119125 557 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm14428-201ENSMUST00000120408 822 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm23430-201ENSMUST00000122490 314 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm22601-201ENSMUST00000157595 250 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm26404-201ENSMUST00000158498 109 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm26159-201ENSMUST00000158968 104 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm3216-201ENSMUST00000166927 486 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm26731-201ENSMUST00000180683 543 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm37869-201ENSMUST00000193385 595 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm38221-201ENSMUST00000195146 365 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm44376-201ENSMUST00000197570 128 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Mir409-201ENSMUST00000198153 79 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm34783-201ENSMUST00000209159 303 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm23614-201ENSMUST00000082598 107 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 AC158388.2-201ENSMUST00000223665 1314 ntBASIC4.71□□□□□ -1.66
Rnf220Q6PDX6 AC115891.1-201ENSMUST00000215798 1755 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm14086-201ENSMUST00000117152 173 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm12285-201ENSMUST00000117347 233 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm14559-201ENSMUST00000121745 496 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm16259-201ENSMUST00000145241 553 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm2182-201ENSMUST00000145243 663 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm26489-201ENSMUST00000157880 264 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm25459-201ENSMUST00000157953 114 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm23224-201ENSMUST00000158122 271 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm25246-201ENSMUST00000175476 69 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm36953-201ENSMUST00000195295 268 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm37445-201ENSMUST00000195318 242 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm43007-201ENSMUST00000197618 291 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm42475-201ENSMUST00000201212 295 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm17906-201ENSMUST00000202480 901 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 AC164117.2-201ENSMUST00000222090 327 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 AC192333.2-201ENSMUST00000224771 196 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Gm16335-201ENSMUST00000077495 309 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf220Q6PDX6 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms