Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sp140Q6NSQ5 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.71□□□□□ -1.66
Sp140Q6NSQ5 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Sp140Q6NSQ5 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm12062-201ENSMUST00000117533 259 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm13379-201ENSMUST00000118053 621 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm15387-201ENSMUST00000120421 648 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Mup-ps2-201ENSMUST00000142602 533 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm26098-201ENSMUST00000157247 288 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm22870-201ENSMUST00000157501 112 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm25383-201ENSMUST00000157810 144 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm22076-201ENSMUST00000158601 84 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm29552-201ENSMUST00000190548 660 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm37164-201ENSMUST00000192809 637 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm37272-201ENSMUST00000193401 488 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm43070-201ENSMUST00000196938 415 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm5983-201ENSMUST00000197739 770 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm22897-201ENSMUST00000197860 128 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm19457-201ENSMUST00000200995 448 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm18672-201ENSMUST00000208035 270 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm44910-201ENSMUST00000208451 396 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 AC153971.2-201ENSMUST00000214553 777 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 mt-Tr-201ENSMUST00000082412 68 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Rny3-201ENSMUST00000083011 102 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm5518-201ENSMUST00000084171 648 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 AC154511.1-201ENSMUST00000222578 1587 ntBASIC4.7□□□□□ -1.66
Sp140Q6NSQ5 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm14933-201ENSMUST00000118840 481 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm12379-201ENSMUST00000119607 391 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm14516-201ENSMUST00000120012 252 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm7840-201ENSMUST00000122086 533 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm22514-201ENSMUST00000122547 308 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm22819-201ENSMUST00000157445 303 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm24664-201ENSMUST00000158939 100 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm25874-201ENSMUST00000178030 79 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Mir6341-201ENSMUST00000183490 121 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm29596-201ENSMUST00000185710 385 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm29610-201ENSMUST00000187749 453 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm37881-201ENSMUST00000193001 421 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm37636-201ENSMUST00000193583 359 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm29793-201ENSMUST00000202874 460 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm44002-201ENSMUST00000205134 594 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm44523-201ENSMUST00000205616 417 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm7128-201ENSMUST00000211639 533 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sp140Q6NSQ5 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms