Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Six4Q61321 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC3.63□□□□□ -1.83
Six4Q61321 Gm38098-201ENSMUST00000194115 241 ntBASIC3.63□□□□□ -1.83
Six4Q61321 Gm38332-201ENSMUST00000194189 147 ntBASIC3.63□□□□□ -1.83
Six4Q61321 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Six4Q61321 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.63□□□□□ -1.83
Six4Q61321 Gm19039-201ENSMUST00000204363 575 ntBASIC3.63□□□□□ -1.83
Six4Q61321 Gm44703-201ENSMUST00000205724 248 ntBASIC3.63□□□□□ -1.83
Six4Q61321 Gm45474-201ENSMUST00000209471 408 ntBASIC3.63□□□□□ -1.83
Six4Q61321 Gm45317-201ENSMUST00000210385 223 ntBASIC3.63□□□□□ -1.83
Six4Q61321 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Six4Q61321 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.63□□□□□ -1.83
Six4Q61321 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.63□□□□□ -1.83
Six4Q61321 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.63□□□□□ -1.83
Six4Q61321 AC122465.3-201ENSMUST00000221644 355 ntBASIC3.63□□□□□ -1.83
Six4Q61321 CT030166.1-201ENSMUST00000222654 357 ntBASIC3.63□□□□□ -1.83
Six4Q61321 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Six4Q61321 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.63□□□□□ -1.83
Six4Q61321 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Six4Q61321 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.63□□□□□ -1.83
Six4Q61321 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Six4Q61321 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.63□□□□□ -1.83
Six4Q61321 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Six4Q61321 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.63□□□□□ -1.83
Six4Q61321 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Six4Q61321 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Six4Q61321 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Six4Q61321 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Six4Q61321 Gm15074-201ENSMUST00000117603 936 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Gm11913-201ENSMUST00000119094 336 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Gm11404-201ENSMUST00000120872 494 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Gm11260-201ENSMUST00000121163 942 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Gm25105-201ENSMUST00000122477 130 ntBASIC3.62□□□□□ -1.83
Six4Q61321 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Six4Q61321 Mir6975-201ENSMUST00000184879 61 ntBASIC3.62□□□□□ -1.83
Six4Q61321 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Six4Q61321 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.62□□□□□ -1.83
Six4Q61321 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Six4Q61321 Gm36964-201ENSMUST00000191876 198 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Gm7182-201ENSMUST00000193351 732 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Trbv27-201ENSMUST00000193711 277 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Gm37575-201ENSMUST00000195467 309 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC3.62□□□□□ -1.83
Six4Q61321 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Six4Q61321 Gm44611-201ENSMUST00000207507 355 ntBASIC3.62□□□□□ -1.83
Six4Q61321 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Gm19219-201ENSMUST00000215863 724 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Gm7119-201ENSMUST00000221345 695 ntBASIC3.62□□□□□ -1.83
Six4Q61321 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Six4Q61321 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Six4Q61321 Gm26449-201ENSMUST00000082452 104 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Gm24917-201ENSMUST00000083935 104 ntBASIC3.62□□□□□ -1.83
Six4Q61321 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Six4Q61321 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Six4Q61321 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
Six4Q61321 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Six4Q61321 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Six4Q61321 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Six4Q61321 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Six4Q61321 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Six4Q61321 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Six4Q61321 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Six4Q61321 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Six4Q61321 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.61□□□□□ -1.83
Six4Q61321 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Six4Q61321 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.61□□□□□ -1.83
Six4Q61321 Gm14975-201ENSMUST00000118741 664 ntBASIC3.61□□□□□ -1.83
Six4Q61321 Gm14875-201ENSMUST00000120881 319 ntBASIC3.61□□□□□ -1.83
Six4Q61321 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Six4Q61321 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Six4Q61321 Gm7846-201ENSMUST00000145844 274 ntBASIC3.61□□□□□ -1.83
Six4Q61321 Gm22034-201ENSMUST00000157283 134 ntBASIC3.61□□□□□ -1.83
Six4Q61321 Gm23666-201ENSMUST00000158053 116 ntBASIC3.61□□□□□ -1.83
Six4Q61321 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.61□□□□□ -1.83
Six4Q61321 Snord92-201ENSMUST00000175548 85 ntBASIC3.61□□□□□ -1.83
Six4Q61321 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Six4Q61321 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.61□□□□□ -1.83
Six4Q61321 Gm28148-201ENSMUST00000186924 697 ntBASIC3.61□□□□□ -1.83
Six4Q61321 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Six4Q61321 Gm29038-201ENSMUST00000191543 678 ntBASIC3.61□□□□□ -1.83
Six4Q61321 Gm44355-201ENSMUST00000200417 104 ntBASIC3.61□□□□□ -1.83
Six4Q61321 Gm42850-201ENSMUST00000202094 201 ntBASIC3.61□□□□□ -1.83
Six4Q61321 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.61□□□□□ -1.83
Six4Q61321 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.61□□□□□ -1.83
Six4Q61321 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.61□□□□□ -1.83
Six4Q61321 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.61□□□□□ -1.83
Six4Q61321 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.61□□□□□ -1.83
Six4Q61321 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Six4Q61321 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Six4Q61321 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Six4Q61321 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.61□□□□□ -1.83
Six4Q61321 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.61□□□□□ -1.83
Six4Q61321 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Six4Q61321 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Six4Q61321 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms