Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm24965-201ENSMUST00000157922 106 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Snord92-201ENSMUST00000175548 85 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm29704-201ENSMUST00000196011 253 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm43601-201ENSMUST00000196294 945 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm8703-201ENSMUST00000203793 730 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm8942-201ENSMUST00000217892 400 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Upf3bQ3ULL6 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm9078-201ENSMUST00000119126 617 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm15026-201ENSMUST00000119219 458 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm13459-201ENSMUST00000121558 646 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm23467-201ENSMUST00000157127 159 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm24998-201ENSMUST00000157908 89 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm26001-201ENSMUST00000157989 103 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm25817-201ENSMUST00000177758 121 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm24766-201ENSMUST00000179182 121 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Mir6385-201ENSMUST00000184295 105 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm6680-201ENSMUST00000192789 950 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm36247-201ENSMUST00000211834 285 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm7034-201ENSMUST00000218638 645 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.82□□□□□ -1.8
Upf3bQ3ULL6 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm14975-201ENSMUST00000118741 664 ntBASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm14541-201ENSMUST00000118985 157 ntBASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm14926-201ENSMUST00000120650 508 ntBASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm26171-201ENSMUST00000158422 131 ntBASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm16490-201ENSMUST00000165299 351 ntBASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm27773-201ENSMUST00000184087 78 ntBASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm37575-201ENSMUST00000195467 309 ntBASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm7786-201ENSMUST00000210494 436 ntBASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Upf3bQ3ULL6 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Gm336-201ENSMUST00000186376 1480 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Gm14786-201ENSMUST00000117127 944 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Gm11408-201ENSMUST00000117889 519 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Gm12230-201ENSMUST00000118301 454 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Gm13557-201ENSMUST00000120771 382 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Gm13460-201ENSMUST00000121274 353 ntBASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.8□□□□□ -1.8
Upf3bQ3ULL6 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms