Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox9Q04887 Gm11321-201ENSMUST00000121257 902 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 Gm23964-201ENSMUST00000157966 107 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.17□□□□□ -1.58
Sox9Q04887 Gm4134-201ENSMUST00000173244 563 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 Mir5710-201ENSMUST00000176884 69 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox9Q04887 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.17□□□□□ -1.58
Sox9Q04887 Gm38185-201ENSMUST00000193195 694 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 Gm44402-201ENSMUST00000203677 238 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.17□□□□□ -1.58
Sox9Q04887 Gm7380-201ENSMUST00000211599 466 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox9Q04887 Gm29884-201ENSMUST00000218403 453 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 Gm19441-201ENSMUST00000221545 330 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 AC133101.1-201ENSMUST00000226939 1199 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox9Q04887 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox9Q04887 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox9Q04887 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Sox9Q04887 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox9Q04887 Gm45262-201ENSMUST00000209917 1463 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.17□□□□□ -1.58
Sox9Q04887 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox9Q04887 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox9Q04887 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox9Q04887 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Sox9Q04887 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Sox9Q04887 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox9Q04887 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sox9Q04887 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Sox9Q04887 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sox9Q04887 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sox9Q04887 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Sox9Q04887 Gm14358-201ENSMUST00000118458 403 ntBASIC5.16□□□□□ -1.58
Sox9Q04887 Gm14128-201ENSMUST00000119514 1011 ntBASIC5.16□□□□□ -1.58
Sox9Q04887 Gm13482-201ENSMUST00000119842 254 ntBASIC5.16□□□□□ -1.58
Sox9Q04887 Gm13932-201ENSMUST00000120873 610 ntBASIC5.16□□□□□ -1.58
Sox9Q04887 Gm14732-201ENSMUST00000121372 545 ntBASIC5.16□□□□□ -1.58
Sox9Q04887 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.16□□□□□ -1.58
Sox9Q04887 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC5.16□□□□□ -1.58
Sox9Q04887 Gm25058-201ENSMUST00000157365 128 ntBASIC5.16□□□□□ -1.58
Sox9Q04887 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox9Q04887 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox9Q04887 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.16□□□□□ -1.58
Sox9Q04887 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox9Q04887 Cfap61-214ENSMUST00000167179 183 ntBASIC5.16□□□□□ -1.58
Sox9Q04887 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.16□□□□□ -1.58
Sox9Q04887 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.16□□□□□ -1.58
Sox9Q04887 Gm9443-201ENSMUST00000188406 816 ntBASIC5.16□□□□□ -1.58
Sox9Q04887 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
Sox9Q04887 Gm20811-201ENSMUST00000190500 553 ntBASIC5.16□□□□□ -1.58
Sox9Q04887 Gm7786-201ENSMUST00000210494 436 ntBASIC5.16□□□□□ -1.58
Sox9Q04887 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sox9Q04887 Gm18997-201ENSMUST00000216353 822 ntBASIC5.16□□□□□ -1.58
Sox9Q04887 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sox9Q04887 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC5.16□□□□□ -1.58
Sox9Q04887 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.16□□□□□ -1.58
Sox9Q04887 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.16□□□□□ -1.58
Sox9Q04887 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Sox9Q04887 Gm25592-201ENSMUST00000082635 131 ntBASIC5.16□□□□□ -1.58
Sox9Q04887 Snora30-201ENSMUST00000083325 130 ntBASIC5.16□□□□□ -1.58
Sox9Q04887 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sox9Q04887 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox9Q04887 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sox9Q04887 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Sox9Q04887 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox9Q04887 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox9Q04887 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox9Q04887 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
Sox9Q04887 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sox9Q04887 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox9Q04887 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sox9Q04887 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Sox9Q04887 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.15□□□□□ -1.58
Sox9Q04887 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Sox9Q04887 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Sox9Q04887 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Sox9Q04887 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Sox9Q04887 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.15□□□□□ -1.58
Sox9Q04887 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
Sox9Q04887 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Sox9Q04887 Gm23594-201ENSMUST00000104307 134 ntBASIC5.15□□□□□ -1.59
Sox9Q04887 Gm25563-201ENSMUST00000104603 74 ntBASIC5.15□□□□□ -1.59
Sox9Q04887 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Sox9Q04887 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Sox9Q04887 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.15□□□□□ -1.59
Sox9Q04887 Gm8757-201ENSMUST00000119660 372 ntBASIC5.15□□□□□ -1.59
Sox9Q04887 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Sox9Q04887 Gm14845-201ENSMUST00000121259 306 ntBASIC5.15□□□□□ -1.59
Sox9Q04887 Gm22452-201ENSMUST00000122804 104 ntBASIC5.15□□□□□ -1.59
Sox9Q04887 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Sox9Q04887 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.15□□□□□ -1.59
Sox9Q04887 Gm16101-201ENSMUST00000160695 430 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms