Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm15946-201ENSMUST00000160654 423 ntBASIC3.12□□□□□ -1.91
Nkx3-1P97436 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Nkx3-1P97436 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm23152-201ENSMUST00000175322 116 ntBASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm14527-201ENSMUST00000179300 639 ntBASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm28596-201ENSMUST00000185870 696 ntBASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm37293-201ENSMUST00000191658 295 ntBASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm37828-201ENSMUST00000192496 432 ntBASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm32295-201ENSMUST00000192558 696 ntBASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm31260-201ENSMUST00000193478 696 ntBASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.12□□□□□ -1.91
Nkx3-1P97436 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.12□□□□□ -1.91
Nkx3-1P97436 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.12□□□□□ -1.91
Nkx3-1P97436 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm9472-201ENSMUST00000221625 526 ntBASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm2710-201ENSMUST00000073196 603 ntBASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm24533-201ENSMUST00000083138 196 ntBASIC3.12□□□□□ -1.91
Nkx3-1P97436 Mir365-2-201ENSMUST00000083555 112 ntBASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm25630-201ENSMUST00000084000 162 ntBASIC3.12□□□□□ -1.91
Nkx3-1P97436 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.12□□□□□ -1.91
Nkx3-1P97436 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Nkx3-1P97436 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Nkx3-1P97436 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm24382-201ENSMUST00000122698 107 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm24059-201ENSMUST00000157493 312 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm24930-201ENSMUST00000158315 83 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm24976-201ENSMUST00000158972 135 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm28574-201ENSMUST00000185757 699 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm28781-201ENSMUST00000185760 696 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm28339-201ENSMUST00000185845 696 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm29062-201ENSMUST00000186032 694 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm29574-201ENSMUST00000186226 696 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm28828-201ENSMUST00000186601 696 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm28057-201ENSMUST00000186603 615 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm28148-201ENSMUST00000186924 697 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm28255-201ENSMUST00000187101 694 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm29307-201ENSMUST00000187367 696 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm28397-201ENSMUST00000187970 699 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm28896-201ENSMUST00000188609 696 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm29545-201ENSMUST00000188878 694 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm29339-201ENSMUST00000189613 696 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm28159-201ENSMUST00000190296 696 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm29366-201ENSMUST00000190481 699 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm29407-201ENSMUST00000191468 696 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm37433-201ENSMUST00000192695 678 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm37441-201ENSMUST00000194430 678 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm38107-201ENSMUST00000194873 696 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm37720-201ENSMUST00000195497 1241 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm43974-201ENSMUST00000205080 684 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm44513-201ENSMUST00000206811 439 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm36776-201ENSMUST00000207006 203 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.11□□□□□ -1.91
Nkx3-1P97436 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.11□□□□□ -1.91
Nkx3-1P97436 AC126554.4-201ENSMUST00000221055 409 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.11□□□□□ -1.91
Nkx3-1P97436 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Nkx3-1P97436 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Nkx3-1P97436 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
Nkx3-1P97436 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm24950-201ENSMUST00000082768 191 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm23971-201ENSMUST00000083317 191 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm23849-201ENSMUST00000083833 191 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm26316-201ENSMUST00000083886 191 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Nkx3-1P97436 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Nkx3-1P97436 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.11□□□□□ -1.91
Nkx3-1P97436 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Nkx3-1P97436 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Nkx3-1P97436 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.11□□□□□ -1.91
Nkx3-1P97436 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.1□□□□□ -1.91
Nkx3-1P97436 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Nkx3-1P97436 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gm9043-201ENSMUST00000119677 314 ntBASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gm11260-201ENSMUST00000121163 942 ntBASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gm16471-201ENSMUST00000121940 618 ntBASIC3.1□□□□□ -1.91
Nkx3-1P97436 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gm6486-201ENSMUST00000166202 434 ntBASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Nkx3-1P97436 Gm18522-201ENSMUST00000173947 650 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms