Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm14821-201ENSMUST00000121975 435 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm14333-201ENSMUST00000130484 264 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm23408-201ENSMUST00000158523 265 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC4.83□□□□□ -1.64
Sf3b6P59708 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm26430-201ENSMUST00000178054 107 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm23191-201ENSMUST00000179147 107 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm29228-201ENSMUST00000185489 418 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm4854-201ENSMUST00000185902 574 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm28552-201ENSMUST00000190725 388 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm28408-201ENSMUST00000191557 463 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm37492-201ENSMUST00000191948 376 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm18964-201ENSMUST00000193013 563 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm44041-201ENSMUST00000203678 396 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm44571-201ENSMUST00000208092 533 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm18602-201ENSMUST00000209794 851 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm18587-201ENSMUST00000213736 841 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sf3b6P59708 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 AC156802.1-201ENSMUST00000223623 579 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 CT956049.1-201ENSMUST00000225671 763 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sf3b6P59708 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sf3b6P59708 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Sf3b6P59708 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sf3b6P59708 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm23848-201ENSMUST00000083826 106 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sf3b6P59708 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.83□□□□□ -1.64
Sf3b6P59708 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sf3b6P59708 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sf3b6P59708 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.83□□□□□ -1.64
Sf3b6P59708 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
Sf3b6P59708 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Sf3b6P59708 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sf3b6P59708 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
Sf3b6P59708 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sf3b6P59708 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sf3b6P59708 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sf3b6P59708 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
Sf3b6P59708 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm15011-201ENSMUST00000117724 1480 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Sf3b6P59708 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Sf3b6P59708 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sf3b6P59708 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sf3b6P59708 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Sf3b6P59708 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Mir599-201ENSMUST00000102378 88 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm25943-201ENSMUST00000103791 90 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Mir466b-7-201ENSMUST00000103804 88 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Mir466b-5-201ENSMUST00000103900 88 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm22021-201ENSMUST00000104353 107 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm24889-201ENSMUST00000104388 132 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm25560-201ENSMUST00000104606 176 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm12285-201ENSMUST00000117347 233 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm14852-201ENSMUST00000120065 647 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm14101-201ENSMUST00000121502 473 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm23837-201ENSMUST00000122656 286 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm23078-201ENSMUST00000157848 148 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm16164-201ENSMUST00000160078 468 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm15812-201ENSMUST00000162331 748 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm16490-201ENSMUST00000165299 351 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm20673-201ENSMUST00000177167 430 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Mir466b-4-201ENSMUST00000178801 90 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm25285-201ENSMUST00000178951 90 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm24968-201ENSMUST00000179817 107 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Mir466b-6-201ENSMUST00000180061 90 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Mir466c-2-201ENSMUST00000180211 90 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm7745-201ENSMUST00000182235 973 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm26960-201ENSMUST00000182263 412 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.82□□□□□ -1.64
Sf3b6P59708 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.82□□□□□ -1.64
Sf3b6P59708 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms