Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm17887-201ENSMUST00000200194 547 ntBASIC4.29□□□□□ -1.72
NcanP55066 Gm43036-201ENSMUST00000200594 373 ntBASIC4.29□□□□□ -1.72
NcanP55066 Gm45379-201ENSMUST00000211772 549 ntBASIC4.29□□□□□ -1.72
NcanP55066 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NcanP55066 AC132833.3-201ENSMUST00000227472 866 ntBASIC4.29□□□□□ -1.72
NcanP55066 Gm24817-201ENSMUST00000093672 105 ntBASIC4.29□□□□□ -1.72
NcanP55066 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NcanP55066 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.29□□□□□ -1.72
NcanP55066 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
NcanP55066 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.29□□□□□ -1.72
NcanP55066 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NcanP55066 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.29□□□□□ -1.72
NcanP55066 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
NcanP55066 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NcanP55066 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
NcanP55066 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.28□□□□□ -1.72
NcanP55066 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NcanP55066 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NcanP55066 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.28□□□□□ -1.72
NcanP55066 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
NcanP55066 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
NcanP55066 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NcanP55066 Mir105-201ENSMUST00000104655 80 ntBASIC4.28□□□□□ -1.72
NcanP55066 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm8129-201ENSMUST00000118230 213 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm11877-201ENSMUST00000118921 852 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.28□□□□□ -1.72
NcanP55066 Gm22646-201ENSMUST00000175130 115 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm24019-201ENSMUST00000178620 107 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm26243-201ENSMUST00000179260 107 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm27864-201ENSMUST00000183704 190 ntBASIC4.28□□□□□ -1.72
NcanP55066 Olfr1055-202ENSMUST00000188023 939 ntBASIC4.28□□□□□ -1.72
NcanP55066 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm28997-201ENSMUST00000188759 429 ntBASIC4.28□□□□□ -1.72
NcanP55066 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
NcanP55066 Gm43476-201ENSMUST00000197873 405 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm18611-201ENSMUST00000200334 1118 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm19761-201ENSMUST00000205372 391 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC4.28□□□□□ -1.72
NcanP55066 Gm44765-201ENSMUST00000206927 601 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.28□□□□□ -1.72
NcanP55066 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
NcanP55066 Gm18228-201ENSMUST00000217297 1091 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm21007-201ENSMUST00000221024 326 ntBASIC4.28□□□□□ -1.72
NcanP55066 AC107369.1-201ENSMUST00000227373 860 ntBASIC4.28□□□□□ -1.72
NcanP55066 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NcanP55066 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NcanP55066 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NcanP55066 Gm23296-201ENSMUST00000082555 107 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm24859-201ENSMUST00000082729 107 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm23377-201ENSMUST00000082943 126 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm25821-201ENSMUST00000093657 133 ntBASIC4.28□□□□□ -1.72
NcanP55066 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NcanP55066 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NcanP55066 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NcanP55066 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC4.28□□□□□ -1.72
NcanP55066 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.28□□□□□ -1.72
NcanP55066 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.28□□□□□ -1.72
NcanP55066 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NcanP55066 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
NcanP55066 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.27□□□□□ -1.73
NcanP55066 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
NcanP55066 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NcanP55066 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NcanP55066 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
NcanP55066 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.27□□□□□ -1.73
NcanP55066 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NcanP55066 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NcanP55066 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.27□□□□□ -1.73
NcanP55066 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NcanP55066 Gm14101-201ENSMUST00000121502 473 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gm12071-201ENSMUST00000121968 469 ntBASIC4.27□□□□□ -1.73
NcanP55066 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NcanP55066 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NcanP55066 Mir3058-201ENSMUST00000175126 91 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gm25525-201ENSMUST00000177701 107 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gm26178-201ENSMUST00000177706 107 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gm26465-201ENSMUST00000178517 107 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gm24317-201ENSMUST00000178536 107 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gm25021-201ENSMUST00000179184 107 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gm22995-201ENSMUST00000179670 107 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gm24424-201ENSMUST00000179714 107 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gm24389-201ENSMUST00000179962 107 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gm25672-201ENSMUST00000180111 107 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gm29163-201ENSMUST00000188029 107 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.27□□□□□ -1.73
NcanP55066 Gm6140-201ENSMUST00000192494 966 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gm43005-201ENSMUST00000199015 648 ntBASIC4.27□□□□□ -1.73
NcanP55066 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC4.27□□□□□ -1.73
NcanP55066 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.27□□□□□ -1.73
NcanP55066 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.27□□□□□ -1.73
NcanP55066 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.27□□□□□ -1.73
NcanP55066 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NcanP55066 Gm23815-201ENSMUST00000083231 107 ntBASIC4.27□□□□□ -1.73
NcanP55066 Mir101b-201ENSMUST00000083622 97 ntBASIC4.27□□□□□ -1.73
NcanP55066 Gm23520-201ENSMUST00000093736 107 ntBASIC4.27□□□□□ -1.73
NcanP55066 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms