Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.53□□□□□ -1.52
Sox1P53783 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Sox1P53783 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox1P53783 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox1P53783 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox1P53783 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox1P53783 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sox1P53783 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.53□□□□□ -1.52
Sox1P53783 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.53□□□□□ -1.52
Sox1P53783 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.53□□□□□ -1.52
Sox1P53783 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.53□□□□□ -1.52
Sox1P53783 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Sox1P53783 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sox1P53783 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC5.53□□□□□ -1.52
Sox1P53783 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sox1P53783 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Sox1P53783 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC5.53□□□□□ -1.52
Sox1P53783 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.53□□□□□ -1.52
Sox1P53783 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.53□□□□□ -1.52
Sox1P53783 Gm25339-201ENSMUST00000157458 232 ntBASIC5.53□□□□□ -1.52
Sox1P53783 Gm22940-201ENSMUST00000158560 155 ntBASIC5.53□□□□□ -1.52
Sox1P53783 Mir3066-201ENSMUST00000175296 83 ntBASIC5.53□□□□□ -1.52
Sox1P53783 Gm23793-201ENSMUST00000179396 117 ntBASIC5.53□□□□□ -1.52
Sox1P53783 Gm28995-201ENSMUST00000186625 261 ntBASIC5.53□□□□□ -1.52
Sox1P53783 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC5.53□□□□□ -1.52
Sox1P53783 Gm37455-201ENSMUST00000191993 529 ntBASIC5.53□□□□□ -1.52
Sox1P53783 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC5.53□□□□□ -1.52
Sox1P53783 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sox1P53783 Gm45438-201ENSMUST00000210242 564 ntBASIC5.53□□□□□ -1.52
Sox1P53783 AC093926.1-201ENSMUST00000213730 243 ntBASIC5.53□□□□□ -1.52
Sox1P53783 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC5.53□□□□□ -1.52
Sox1P53783 AC156790.5-201ENSMUST00000227075 231 ntBASIC5.53□□□□□ -1.52
Sox1P53783 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sox1P53783 Gm25579-201ENSMUST00000083407 106 ntBASIC5.53□□□□□ -1.52
Sox1P53783 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.53□□□□□ -1.52
Sox1P53783 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sox1P53783 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.53□□□□□ -1.52
Sox1P53783 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox1P53783 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox1P53783 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sox1P53783 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.53□□□□□ -1.52
Sox1P53783 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Sox1P53783 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sox1P53783 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sox1P53783 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC5.53□□□□□ -1.52
Sox1P53783 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox1P53783 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox1P53783 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox1P53783 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox1P53783 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox1P53783 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.52□□□□□ -1.53
Sox1P53783 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Sox1P53783 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sox1P53783 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox1P53783 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox1P53783 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.52□□□□□ -1.53
Sox1P53783 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox1P53783 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
Sox1P53783 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC5.52□□□□□ -1.53
Sox1P53783 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sox1P53783 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC5.52□□□□□ -1.53
Sox1P53783 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sox1P53783 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox1P53783 Gm11970-201ENSMUST00000116105 320 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Gm13439-201ENSMUST00000117541 409 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Gm8145-201ENSMUST00000118220 745 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Gm14876-201ENSMUST00000120795 327 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Gm23214-201ENSMUST00000122716 157 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.52□□□□□ -1.53
Sox1P53783 Gm24730-201ENSMUST00000158228 117 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Gm23191-201ENSMUST00000179147 107 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Gm8807-201ENSMUST00000179328 492 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Sox1P53783 Gm29196-201ENSMUST00000189239 618 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sox1P53783 Gm37757-201ENSMUST00000193072 210 ntBASIC5.52□□□□□ -1.53
Sox1P53783 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC5.52□□□□□ -1.53
Sox1P53783 Gm44011-201ENSMUST00000203336 394 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Gm45236-201ENSMUST00000208632 229 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Gm7675-201ENSMUST00000208828 686 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC5.52□□□□□ -1.53
Sox1P53783 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.52□□□□□ -1.53
Sox1P53783 Gm2446-201ENSMUST00000220144 772 ntBASIC5.52□□□□□ -1.53
Sox1P53783 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.52□□□□□ -1.53
Sox1P53783 AC120553.1-201ENSMUST00000227313 260 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox1P53783 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Sox1P53783 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sox1P53783 Gm25592-201ENSMUST00000082635 131 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Gm25008-201ENSMUST00000083809 81 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
Sox1P53783 Gm37064-201ENSMUST00000193851 2231 ntBASIC5.52□□□□□ -1.53
Sox1P53783 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.52□□□□□ -1.53
Sox1P53783 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms