Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox18P43680 Gm15783-201ENSMUST00000117521 633 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Gm15195-201ENSMUST00000118775 263 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Gm12779-201ENSMUST00000121496 143 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Gm12396-201ENSMUST00000121600 306 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.81□□□□□ -1.48
Sox18P43680 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.81□□□□□ -1.48
Sox18P43680 Gm25624-201ENSMUST00000157222 275 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Gm25654-201ENSMUST00000158467 88 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Gm10075-201ENSMUST00000162030 545 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Gm24862-201ENSMUST00000179103 79 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Gm23310-201ENSMUST00000179105 79 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Gm25461-201ENSMUST00000179293 79 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Mir6963-201ENSMUST00000183535 71 ntBASIC5.81□□□□□ -1.48
Sox18P43680 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.81□□□□□ -1.48
Sox18P43680 Gm7837-201ENSMUST00000190873 412 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Gm19126-201ENSMUST00000207896 509 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Gm6112-201ENSMUST00000208037 629 ntBASIC5.81□□□□□ -1.48
Sox18P43680 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.81□□□□□ -1.48
Sox18P43680 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Gm5229-201ENSMUST00000039375 354 ntBASIC5.81□□□□□ -1.48
Sox18P43680 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox18P43680 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.81□□□□□ -1.48
Sox18P43680 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox18P43680 AC133079.1-201ENSMUST00000220943 1881 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox18P43680 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.81□□□□□ -1.48
Sox18P43680 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox18P43680 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sox18P43680 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox18P43680 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox18P43680 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox18P43680 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sox18P43680 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.81□□□□□ -1.48
Sox18P43680 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sox18P43680 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.81□□□□□ -1.48
Sox18P43680 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox18P43680 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
Sox18P43680 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox18P43680 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox18P43680 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox18P43680 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox18P43680 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox18P43680 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.8□□□□□ -1.48
Sox18P43680 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox18P43680 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Sox18P43680 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox18P43680 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox18P43680 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox18P43680 Mir678-201ENSMUST00000102114 84 ntBASIC5.8□□□□□ -1.48
Sox18P43680 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox18P43680 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox18P43680 Gm23841-201ENSMUST00000116951 114 ntBASIC5.8□□□□□ -1.48
Sox18P43680 Gm12118-201ENSMUST00000119766 532 ntBASIC5.8□□□□□ -1.48
Sox18P43680 Gm12115-201ENSMUST00000119969 447 ntBASIC5.8□□□□□ -1.48
Sox18P43680 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.8□□□□□ -1.48
Sox18P43680 Gm23965-201ENSMUST00000157969 142 ntBASIC5.8□□□□□ -1.48
Sox18P43680 Gm21816-201ENSMUST00000179255 360 ntBASIC5.8□□□□□ -1.48
Sox18P43680 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.8□□□□□ -1.48
Sox18P43680 Gm28385-201ENSMUST00000185671 292 ntBASIC5.8□□□□□ -1.48
Sox18P43680 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.8□□□□□ -1.48
Sox18P43680 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox18P43680 Gm7780-201ENSMUST00000214787 406 ntBASIC5.8□□□□□ -1.48
Sox18P43680 AC158622.1-201ENSMUST00000217107 230 ntBASIC5.8□□□□□ -1.48
Sox18P43680 Gm18413-201ENSMUST00000221573 655 ntBASIC5.8□□□□□ -1.48
Sox18P43680 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.8□□□□□ -1.48
Sox18P43680 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox18P43680 AC101945.1-201ENSMUST00000226734 466 ntBASIC5.8□□□□□ -1.48
Sox18P43680 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox18P43680 Gm23502-201ENSMUST00000083902 145 ntBASIC5.8□□□□□ -1.48
Sox18P43680 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox18P43680 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox18P43680 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox18P43680 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox18P43680 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.8□□□□□ -1.48
Sox18P43680 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.8□□□□□ -1.48
Sox18P43680 Gm4073-201ENSMUST00000176792 3500 ntBASIC5.8□□□□□ -1.48
Sox18P43680 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox18P43680 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.8□□□□□ -1.48
Sox18P43680 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.8□□□□□ -1.48
Sox18P43680 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sox18P43680 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.79□□□□□ -1.48
Sox18P43680 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Sox18P43680 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.79□□□□□ -1.48
Sox18P43680 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox18P43680 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sox18P43680 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.79□□□□□ -1.48
Sox18P43680 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Sox18P43680 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox18P43680 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
Sox18P43680 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox18P43680 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sox18P43680 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC5.79□□□□□ -1.48
Sox18P43680 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox18P43680 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox18P43680 Gm6062-201ENSMUST00000120462 631 ntBASIC5.79□□□□□ -1.48
Sox18P43680 Gm12494-201ENSMUST00000121684 521 ntBASIC5.79□□□□□ -1.48
Sox18P43680 Gm14970-201ENSMUST00000122289 355 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms