Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm25820-202ENSMUST00000197479 128 ntBASIC3.43□□□□□ -1.86
HttP42859 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.43□□□□□ -1.86
HttP42859 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
HttP42859 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.43□□□□□ -1.86
HttP42859 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HttP42859 Gm8074-201ENSMUST00000095071 252 ntBASIC3.43□□□□□ -1.86
HttP42859 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HttP42859 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
HttP42859 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HttP42859 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
HttP42859 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HttP42859 Gm45324-201ENSMUST00000211193 5638 ntBASIC3.43□□□□□ -1.86
HttP42859 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
HttP42859 Gm8244-201ENSMUST00000121254 264 ntBASIC3.43□□□□□ -1.86
HttP42859 Gm25967-201ENSMUST00000157168 147 ntBASIC3.43□□□□□ -1.86
HttP42859 Gm25863-201ENSMUST00000158249 329 ntBASIC3.43□□□□□ -1.86
HttP42859 Gm3370-201ENSMUST00000171785 500 ntBASIC3.43□□□□□ -1.86
HttP42859 Gm18748-201ENSMUST00000198507 622 ntBASIC3.43□□□□□ -1.86
HttP42859 Gm6064-201ENSMUST00000203999 454 ntBASIC3.43□□□□□ -1.86
HttP42859 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
HttP42859 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
HttP42859 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HttP42859 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HttP42859 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HttP42859 Gm25529-201ENSMUST00000104850 92 ntBASIC3.42□□□□□ -1.86
HttP42859 Gm14142-201ENSMUST00000117833 296 ntBASIC3.42□□□□□ -1.86
HttP42859 Gm26988-201ENSMUST00000183296 945 ntBASIC3.42□□□□□ -1.86
HttP42859 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC3.42□□□□□ -1.86
HttP42859 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC3.42□□□□□ -1.86
HttP42859 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HttP42859 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HttP42859 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HttP42859 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HttP42859 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HttP42859 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HttP42859 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
HttP42859 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HttP42859 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.42□□□□□ -1.86
HttP42859 Gm5058-201ENSMUST00000187331 463 ntBASIC3.42□□□□□ -1.86
HttP42859 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.42□□□□□ -1.86
HttP42859 Gm43992-201ENSMUST00000204358 197 ntBASIC3.42□□□□□ -1.86
HttP42859 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.42□□□□□ -1.86
HttP42859 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.42□□□□□ -1.86
HttP42859 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.42□□□□□ -1.86
HttP42859 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HttP42859 Mir410-201ENSMUST00000083563 81 ntBASIC3.42□□□□□ -1.86
HttP42859 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HttP42859 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
HttP42859 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
HttP42859 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HttP42859 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.42□□□□□ -1.86
HttP42859 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.41□□□□□ -1.86
HttP42859 AC134333.1-201ENSMUST00000204536 944 ntBASIC3.41□□□□□ -1.86
HttP42859 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.41□□□□□ -1.86
HttP42859 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
HttP42859 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HttP42859 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
HttP42859 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.41□□□□□ -1.86
HttP42859 Gm9379-201ENSMUST00000196790 646 ntBASIC3.41□□□□□ -1.86
HttP42859 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.41□□□□□ -1.86
HttP42859 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HttP42859 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HttP42859 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HttP42859 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HttP42859 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.41□□□□□ -1.86
HttP42859 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
HttP42859 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HttP42859 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
HttP42859 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HttP42859 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HttP42859 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
HttP42859 Gm25360-201ENSMUST00000178786 191 ntBASIC3.41□□□□□ -1.86
HttP42859 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.41□□□□□ -1.86
HttP42859 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.41□□□□□ -1.86
HttP42859 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HttP42859 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HttP42859 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HttP42859 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HttP42859 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
HttP42859 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC3.4□□□□□ -1.86
HttP42859 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HttP42859 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.4□□□□□ -1.86
HttP42859 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.4□□□□□ -1.86
HttP42859 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.4□□□□□ -1.86
HttP42859 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC3.4□□□□□ -1.86
HttP42859 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
HttP42859 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.4□□□□□ -1.86
HttP42859 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HttP42859 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.4□□□□□ -1.87
HttP42859 Gm21112-201ENSMUST00000212224 578 ntBASIC3.4□□□□□ -1.87
HttP42859 Gm7760-201ENSMUST00000212265 578 ntBASIC3.4□□□□□ -1.87
HttP42859 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
HttP42859 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC3.4□□□□□ -1.87
HttP42859 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HttP42859 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.39□□□□□ -1.87
HttP42859 Gm11923-201ENSMUST00000118135 508 ntBASIC3.39□□□□□ -1.87
HttP42859 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC3.39□□□□□ -1.87
HttP42859 Gm24922-201ENSMUST00000158511 102 ntBASIC3.39□□□□□ -1.87
HttP42859 Gm20660-201ENSMUST00000177515 289 ntBASIC3.39□□□□□ -1.87
HttP42859 Gm25528-201ENSMUST00000180264 132 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms