Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Usp4P35123 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Usp4P35123 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Usp4P35123 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp4P35123 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp4P35123 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp4P35123 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp4P35123 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp4P35123 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Usp4P35123 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Usp4P35123 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Usp4P35123 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Usp4P35123 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp4P35123 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm44625-201ENSMUST00000207838 1561 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Usp4P35123 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Usp4P35123 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Usp4P35123 Gm24715-201ENSMUST00000102377 95 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Usp4P35123 Gm22468-201ENSMUST00000116680 120 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm26248-201ENSMUST00000116700 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm26137-201ENSMUST00000116701 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm26190-201ENSMUST00000116704 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm24617-201ENSMUST00000116705 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm25778-201ENSMUST00000116713 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm25774-201ENSMUST00000116717 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm22102-201ENSMUST00000116730 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm23177-201ENSMUST00000116784 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm24193-201ENSMUST00000116801 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm24744-201ENSMUST00000116833 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm24427-201ENSMUST00000116896 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm22346-201ENSMUST00000116918 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm23606-201ENSMUST00000116938 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm22029-201ENSMUST00000116940 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm26298-201ENSMUST00000116956 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm23844-201ENSMUST00000116959 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm24484-201ENSMUST00000117009 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm25347-201ENSMUST00000117026 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm22112-201ENSMUST00000117032 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm14159-201ENSMUST00000119832 451 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm17014-201ENSMUST00000120765 168 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm15166-201ENSMUST00000120790 385 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm22991-201ENSMUST00000178126 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm23619-201ENSMUST00000178411 94 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm25754-201ENSMUST00000178653 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm22419-201ENSMUST00000178780 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm24802-201ENSMUST00000178897 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm25208-201ENSMUST00000178964 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm25474-201ENSMUST00000179052 94 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm22047-201ENSMUST00000179176 94 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm24567-201ENSMUST00000179294 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm23943-201ENSMUST00000179712 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm25228-201ENSMUST00000180121 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm23304-201ENSMUST00000180209 121 ntBASIC5.17□□□□□ -1.58
Usp4P35123 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.17□□□□□ -1.58
Usp4P35123 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Usp4P35123 Gm28151-201ENSMUST00000189404 951 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm37209-201ENSMUST00000194109 1276 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm43968-201ENSMUST00000203388 389 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC5.17□□□□□ -1.58
Usp4P35123 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.17□□□□□ -1.58
Usp4P35123 AC116589.3-202ENSMUST00000221770 649 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.17□□□□□ -1.58
Usp4P35123 AC116589.6-201ENSMUST00000222252 649 ntBASIC5.17□□□□□ -1.58
Usp4P35123 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.17□□□□□ -1.58
Usp4P35123 AC144628.2-201ENSMUST00000227374 352 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Usp4P35123 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Usp4P35123 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Usp4P35123 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Usp4P35123 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Usp4P35123 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Usp4P35123 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Usp4P35123 AC120375.2-201ENSMUST00000226532 1853 ntBASIC5.17□□□□□ -1.58
Usp4P35123 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Usp4P35123 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Usp4P35123 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.17□□□□□ -1.58
Usp4P35123 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Usp4P35123 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Usp4P35123 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Usp4P35123 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Usp4P35123 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.16□□□□□ -1.58
Usp4P35123 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
Usp4P35123 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.16□□□□□ -1.58
Usp4P35123 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Usp4P35123 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
Usp4P35123 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Usp4P35123 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Usp4P35123 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Usp4P35123 Gm25563-201ENSMUST00000104603 74 ntBASIC5.16□□□□□ -1.58
Usp4P35123 Gm7657-201ENSMUST00000118851 666 ntBASIC5.16□□□□□ -1.58
Usp4P35123 Gm14046-201ENSMUST00000119389 509 ntBASIC5.16□□□□□ -1.58
Usp4P35123 Gm14516-201ENSMUST00000120012 252 ntBASIC5.16□□□□□ -1.58
Usp4P35123 Gm11909-201ENSMUST00000121424 759 ntBASIC5.16□□□□□ -1.58
Usp4P35123 Gm23867-201ENSMUST00000122649 274 ntBASIC5.16□□□□□ -1.58
Usp4P35123 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Usp4P35123 Gm23513-201ENSMUST00000158181 133 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms