Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Sdc1P18828 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sdc1P18828 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sdc1P18828 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sdc1P18828 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Sdc1P18828 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Sdc1P18828 Gm13650-201ENSMUST00000117729 433 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
Sdc1P18828 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Sdc1P18828 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Sdc1P18828 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Sdc1P18828 Gm25942-201ENSMUST00000180080 110 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 Gm28017-201ENSMUST00000183434 126 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 Gm28396-201ENSMUST00000190309 379 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 Gm5829-201ENSMUST00000191383 351 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 Gm37290-201ENSMUST00000195775 339 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 Gm19620-201ENSMUST00000195972 434 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.13□□□□□ -1.91
Sdc1P18828 Gm4644-201ENSMUST00000197587 400 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 Gm43631-201ENSMUST00000202011 369 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 AC153961.2-201ENSMUST00000218877 164 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 Gm6056-201ENSMUST00000221253 488 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC3.13□□□□□ -1.91
Sdc1P18828 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sdc1P18828 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
Sdc1P18828 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Sdc1P18828 Gm23460-201ENSMUST00000083258 109 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 Mir31-201ENSMUST00000083474 106 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Sdc1P18828 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Sdc1P18828 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Sdc1P18828 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sdc1P18828 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Sdc1P18828 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.13□□□□□ -1.91
Sdc1P18828 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.13□□□□□ -1.91
Sdc1P18828 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Sdc1P18828 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Sdc1P18828 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm14570-201ENSMUST00000119444 391 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm23234-201ENSMUST00000157304 134 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm24061-201ENSMUST00000157489 120 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm22895-201ENSMUST00000157508 308 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm25908-201ENSMUST00000157624 98 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm24773-201ENSMUST00000158513 99 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm3084-201ENSMUST00000169967 598 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Mir3110-201ENSMUST00000175053 80 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm23215-201ENSMUST00000178153 121 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sdc1P18828 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.12□□□□□ -1.91
Sdc1P18828 Mir6911-201ENSMUST00000184241 69 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28847-201ENSMUST00000186778 700 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm29365-201ENSMUST00000189461 699 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 Gm44456-201ENSMUST00000196554 89 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm42451-201ENSMUST00000197410 244 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm43309-201ENSMUST00000200837 458 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC3.12□□□□□ -1.91
Sdc1P18828 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc1P18828 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.12□□□□□ -1.91
Sdc1P18828 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms