Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cdx1P18111 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdx1P18111 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cdx1P18111 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cdx1P18111 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cdx1P18111 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cdx1P18111 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cdx1P18111 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC3.31□□□□□ -1.88
Cdx1P18111 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm24537-201ENSMUST00000157950 102 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Gm25264-201ENSMUST00000158519 117 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Gm23583-201ENSMUST00000158533 289 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm19807-201ENSMUST00000173971 667 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm27883-201ENSMUST00000183941 102 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm6802-202ENSMUST00000186566 126 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Gm6240-201ENSMUST00000208014 473 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Gm30674-201ENSMUST00000214523 392 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Gm9628-201ENSMUST00000222169 725 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cdx1P18111 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.31□□□□□ -1.88
Cdx1P18111 AC174459.2-201ENSMUST00000226036 160 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cdx1P18111 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cdx1P18111 Snora70-201ENSMUST00000083047 137 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cdx1P18111 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cdx1P18111 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.31□□□□□ -1.88
Cdx1P18111 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cdx1P18111 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cdx1P18111 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cdx1P18111 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cdx1P18111 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.31□□□□□ -1.88
Cdx1P18111 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cdx1P18111 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
Cdx1P18111 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Cdx1P18111 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Cdx1P18111 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cdx1P18111 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cdx1P18111 Gm42968-201ENSMUST00000198578 1372 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Mir592-201ENSMUST00000102113 96 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Gm23481-201ENSMUST00000104173 131 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Gm22019-201ENSMUST00000104359 96 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cdx1P18111 Gm24831-201ENSMUST00000116778 126 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Gm6797-201ENSMUST00000119440 512 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Gm11797-201ENSMUST00000121336 754 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Gm11344-201ENSMUST00000122011 335 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Gm22988-201ENSMUST00000122759 144 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.3□□□□□ -1.88
Cdx1P18111 Gm25224-201ENSMUST00000158195 68 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Gm15974-201ENSMUST00000159103 531 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Cdx1P18111 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Cdx1P18111 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cdx1P18111 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cdx1P18111 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.3□□□□□ -1.88
Cdx1P18111 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Cdx1P18111 Gm28997-201ENSMUST00000188759 429 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Gm8823-201ENSMUST00000193158 433 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Gm3933-201ENSMUST00000195391 439 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC3.3□□□□□ -1.88
Cdx1P18111 Gm45380-201ENSMUST00000210465 315 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.3□□□□□ -1.88
Cdx1P18111 Gm45499-201ENSMUST00000211656 280 ntBASIC3.3□□□□□ -1.88
Cdx1P18111 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.3□□□□□ -1.88
Cdx1P18111 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Cdx1P18111 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Cdx1P18111 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cdx1P18111 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cdx1P18111 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 120.5 ms