Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Msx1P13297 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msx1P13297 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Msx1P13297 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Msx1P13297 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Msx1P13297 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msx1P13297 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC5.78□□□□□ -1.48
Msx1P13297 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Msx1P13297 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.78□□□□□ -1.48
Msx1P13297 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.78□□□□□ -1.48
Msx1P13297 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Msx1P13297 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Msx1P13297 Gm25415-201ENSMUST00000104220 132 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Gm23841-201ENSMUST00000116951 114 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Gm13193-201ENSMUST00000117275 225 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Gm8692-201ENSMUST00000118102 438 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Gm14429-201ENSMUST00000121881 2024 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Gm15237-201ENSMUST00000122104 469 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC5.78□□□□□ -1.48
Msx1P13297 Mir1946a-201ENSMUST00000158360 134 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.78□□□□□ -1.48
Msx1P13297 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Msx1P13297 Gm4617-201ENSMUST00000178993 331 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Gm28769-201ENSMUST00000190176 615 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 Gm43436-201ENSMUST00000199308 147 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Gm18213-201ENSMUST00000207850 178 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Gm45002-201ENSMUST00000208045 120 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Gm2059-201ENSMUST00000212025 287 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Msx1P13297 Gm46223-201ENSMUST00000215196 675 ntBASIC5.78□□□□□ -1.48
Msx1P13297 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.78□□□□□ -1.48
Msx1P13297 CT954323.1-201ENSMUST00000222774 229 ntBASIC5.78□□□□□ -1.48
Msx1P13297 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Msx1P13297 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Msx1P13297 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Msx1P13297 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Msx1P13297 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Msx1P13297 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.78□□□□□ -1.48
Msx1P13297 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.78□□□□□ -1.48
Msx1P13297 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msx1P13297 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
Msx1P13297 Gm17969-201ENSMUST00000185706 2557 ntBASIC5.77□□□□□ -1.49
Msx1P13297 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Msx1P13297 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
Msx1P13297 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Msx1P13297 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Msx1P13297 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Msx1P13297 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Msx1P13297 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Msx1P13297 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Msx1P13297 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Msx1P13297 Gm11576-201ENSMUST00000117433 417 ntBASIC5.77□□□□□ -1.49
Msx1P13297 Gm13153-201ENSMUST00000120969 637 ntBASIC5.77□□□□□ -1.49
Msx1P13297 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.77□□□□□ -1.49
Msx1P13297 Gm14768-201ENSMUST00000122126 678 ntBASIC5.77□□□□□ -1.49
Msx1P13297 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.77□□□□□ -1.49
Msx1P13297 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC5.77□□□□□ -1.49
Msx1P13297 Gm12226-201ENSMUST00000144172 876 ntBASIC5.77□□□□□ -1.49
Msx1P13297 Gm25390-201ENSMUST00000157341 103 ntBASIC5.77□□□□□ -1.49
Msx1P13297 Gm23662-201ENSMUST00000158046 111 ntBASIC5.77□□□□□ -1.49
Msx1P13297 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Msx1P13297 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Msx1P13297 Gm30280-201ENSMUST00000192214 262 ntBASIC5.77□□□□□ -1.49
Msx1P13297 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.77□□□□□ -1.49
Msx1P13297 Gm43744-201ENSMUST00000196387 688 ntBASIC5.77□□□□□ -1.49
Msx1P13297 Igkv13-76-201ENSMUST00000197621 347 ntBASIC5.77□□□□□ -1.49
Msx1P13297 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.77□□□□□ -1.49
Msx1P13297 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.77□□□□□ -1.49
Msx1P13297 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.77□□□□□ -1.49
Msx1P13297 Gm20039-201ENSMUST00000210329 394 ntBASIC5.77□□□□□ -1.49
Msx1P13297 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.77□□□□□ -1.49
Msx1P13297 AC158622.1-201ENSMUST00000217107 230 ntBASIC5.77□□□□□ -1.49
Msx1P13297 Gm7042-201ENSMUST00000223027 384 ntBASIC5.77□□□□□ -1.49
Msx1P13297 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.77□□□□□ -1.49
Msx1P13297 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Msx1P13297 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Msx1P13297 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.77□□□□□ -1.49
Msx1P13297 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.77□□□□□ -1.49
Msx1P13297 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms