Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm13504-201ENSMUST00000117490 316 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Gm9208-201ENSMUST00000120468 948 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Gm13865-201ENSMUST00000120957 865 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.92□□□□□ -1.78
Col1a1P11087 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.92□□□□□ -1.78
Col1a1P11087 Gm24819-201ENSMUST00000175094 166 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Gm27532-201ENSMUST00000183726 113 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Gm19726-201ENSMUST00000205008 240 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Gm45031-201ENSMUST00000206800 288 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col1a1P11087 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col1a1P11087 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col1a1P11087 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col1a1P11087 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col1a1P11087 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col1a1P11087 Gm37056-201ENSMUST00000192141 1865 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col1a1P11087 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col1a1P11087 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col1a1P11087 Gm5943-201ENSMUST00000119458 459 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.92□□□□□ -1.78
Col1a1P11087 Gm23671-201ENSMUST00000157472 103 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Gm16101-201ENSMUST00000160695 430 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Gm17421-201ENSMUST00000167845 674 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Gm27893-201ENSMUST00000184408 194 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.92□□□□□ -1.78
Col1a1P11087 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col1a1P11087 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Gm5649-201ENSMUST00000217918 951 ntBASIC3.92□□□□□ -1.78
Col1a1P11087 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col1a1P11087 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
Col1a1P11087 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col1a1P11087 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.91□□□□□ -1.78
Col1a1P11087 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Col1a1P11087 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col1a1P11087 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
Col1a1P11087 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
Col1a1P11087 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col1a1P11087 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
Col1a1P11087 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.91□□□□□ -1.78
Col1a1P11087 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC3.91□□□□□ -1.78
Col1a1P11087 Gm26041-201ENSMUST00000158148 108 ntBASIC3.91□□□□□ -1.78
Col1a1P11087 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.91□□□□□ -1.78
Col1a1P11087 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col1a1P11087 Gm18505-201ENSMUST00000187360 790 ntBASIC3.91□□□□□ -1.78
Col1a1P11087 Gm44887-201ENSMUST00000208980 178 ntBASIC3.91□□□□□ -1.78
Col1a1P11087 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC3.91□□□□□ -1.78
Col1a1P11087 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.91□□□□□ -1.78
Col1a1P11087 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col1a1P11087 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col1a1P11087 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
Col1a1P11087 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.9□□□□□ -1.78
Col1a1P11087 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
Col1a1P11087 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Col1a1P11087 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Col1a1P11087 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Col1a1P11087 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Col1a1P11087 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Col1a1P11087 Gm13761-201ENSMUST00000117238 807 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 Gm12467-201ENSMUST00000117625 745 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 Gm14987-201ENSMUST00000117820 676 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 Gm14901-201ENSMUST00000119001 283 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 Gm13155-201ENSMUST00000119277 646 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 Gm13170-201ENSMUST00000119716 643 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Col1a1P11087 Gm8178-201ENSMUST00000121570 646 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 Gm11471-201ENSMUST00000121824 198 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.9□□□□□ -1.79
Col1a1P11087 Gm24914-201ENSMUST00000157285 313 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.9□□□□□ -1.79
Col1a1P11087 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 Gm26297-201ENSMUST00000179464 132 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC3.9□□□□□ -1.79
Col1a1P11087 Gm44966-201ENSMUST00000208096 157 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 Gm35405-201ENSMUST00000218754 400 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 AC118230.1-201ENSMUST00000220196 656 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.9□□□□□ -1.79
Col1a1P11087 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Col1a1P11087 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.9□□□□□ -1.79
Col1a1P11087 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.9□□□□□ -1.79
Col1a1P11087 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Col1a1P11087 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Col1a1P11087 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC3.89□□□□□ -1.79
Col1a1P11087 Gm22750-201ENSMUST00000102076 103 ntBASIC3.89□□□□□ -1.79
Col1a1P11087 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC3.89□□□□□ -1.79
Col1a1P11087 Gm24190-201ENSMUST00000157976 216 ntBASIC3.89□□□□□ -1.79
Col1a1P11087 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC3.89□□□□□ -1.79
Col1a1P11087 Gm18604-201ENSMUST00000172535 558 ntBASIC3.89□□□□□ -1.79
Col1a1P11087 Gm18520-201ENSMUST00000174783 658 ntBASIC3.89□□□□□ -1.79
Col1a1P11087 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.89□□□□□ -1.79
Col1a1P11087 Gm20773-201ENSMUST00000178940 681 ntBASIC3.89□□□□□ -1.79
Col1a1P11087 Mir6398-201ENSMUST00000184541 102 ntBASIC3.89□□□□□ -1.79
Col1a1P11087 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Col1a1P11087 Gm45269-201ENSMUST00000210359 282 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms