Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm7258-201ENSMUST00000179317 300 ntBASIC3.19□□□□□ -1.9
Col5a1O88207 Gm8600-201ENSMUST00000186320 905 ntBASIC3.19□□□□□ -1.9
Col5a1O88207 Gm26379-202ENSMUST00000200225 132 ntBASIC3.19□□□□□ -1.9
Col5a1O88207 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.19□□□□□ -1.9
Col5a1O88207 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.19□□□□□ -1.9
Col5a1O88207 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col5a1O88207 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col5a1O88207 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col5a1O88207 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col5a1O88207 Gm14988-201ENSMUST00000117224 1548 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col5a1O88207 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col5a1O88207 Gm14667-201ENSMUST00000119448 1350 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col5a1O88207 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col5a1O88207 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col5a1O88207 Gm12288-201ENSMUST00000121054 1282 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.18□□□□□ -1.9
Col5a1O88207 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.18□□□□□ -1.9
Col5a1O88207 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Snord92-201ENSMUST00000175548 85 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col5a1O88207 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col5a1O88207 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col5a1O88207 Gm28781-201ENSMUST00000185760 696 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Gm28339-201ENSMUST00000185845 696 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Gm29574-201ENSMUST00000186226 696 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Gm28828-201ENSMUST00000186601 696 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Gm29307-201ENSMUST00000187367 696 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Gm28896-201ENSMUST00000188609 696 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Gm29339-201ENSMUST00000189613 696 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Gm28159-201ENSMUST00000190296 696 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Gm29407-201ENSMUST00000191468 696 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Gm32340-201ENSMUST00000192883 259 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Gm38107-201ENSMUST00000194873 696 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Gm43214-201ENSMUST00000199242 352 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col5a1O88207 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.18□□□□□ -1.9
Col5a1O88207 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col5a1O88207 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col5a1O88207 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col5a1O88207 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col5a1O88207 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 Gm43466-201ENSMUST00000197836 5214 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
Col5a1O88207 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col5a1O88207 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col5a1O88207 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 Gm9208-201ENSMUST00000120468 948 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 Gm8840-201ENSMUST00000122454 386 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.17□□□□□ -1.9
Col5a1O88207 Gm25967-201ENSMUST00000157168 147 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 Gm16101-201ENSMUST00000160695 430 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 Gm23162-201ENSMUST00000175081 121 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 Gm21960-201ENSMUST00000181924 452 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.17□□□□□ -1.9
Col5a1O88207 Gm29105-201ENSMUST00000187256 450 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 Gm37293-201ENSMUST00000191658 295 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 Gm44319-201ENSMUST00000196974 93 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Col5a1O88207 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.17□□□□□ -1.9
Col5a1O88207 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.17□□□□□ -1.9
Col5a1O88207 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
Col5a1O88207 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col5a1O88207 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
Col5a1O88207 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC3.17□□□□□ -1.9
Col5a1O88207 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.17□□□□□ -1.9
Col5a1O88207 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col5a1O88207 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col5a1O88207 Gm38264-201ENSMUST00000194850 2032 ntBASIC3.17□□□□□ -1.9
Col5a1O88207 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Col5a1O88207 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col5a1O88207 Gm14926-201ENSMUST00000120650 508 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Gm22956-201ENSMUST00000122520 80 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.16□□□□□ -1.9
Col5a1O88207 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Gm29062-201ENSMUST00000186032 694 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Gm28255-201ENSMUST00000187101 694 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Gm29545-201ENSMUST00000188878 694 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Col5a1O88207 Gm3933-201ENSMUST00000195391 439 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Gm6510-201ENSMUST00000195916 574 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Gm7624-201ENSMUST00000209702 435 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.16□□□□□ -1.9
Col5a1O88207 Gm9845-201ENSMUST00000056409 598 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col5a1O88207 Gm22249-201ENSMUST00000082485 136 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col5a1O88207 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col5a1O88207 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.16□□□□□ -1.9
Col5a1O88207 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms