Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cbx4O55187 Gm42566-201ENSMUST00000197120 643 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Gm43142-201ENSMUST00000198670 361 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cbx4O55187 Gm44449-201ENSMUST00000203610 153 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cbx4O55187 AC153541.1-201ENSMUST00000213786 294 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cbx4O55187 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.25□□□□□ -1.73
Cbx4O55187 Zfp640-202ENSMUST00000224116 1562 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cbx4O55187 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cbx4O55187 Mir215-201ENSMUST00000083628 112 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
Cbx4O55187 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cbx4O55187 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cbx4O55187 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cbx4O55187 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC4.25□□□□□ -1.73
Cbx4O55187 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cbx4O55187 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cbx4O55187 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cbx4O55187 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Cbx4O55187 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm7133-201ENSMUST00000187797 2039 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm11878-201ENSMUST00000117908 400 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm11943-201ENSMUST00000119473 327 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm12852-201ENSMUST00000119478 719 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm14927-201ENSMUST00000120283 454 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm16458-201ENSMUST00000121428 502 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm14977-201ENSMUST00000121626 812 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm25052-201ENSMUST00000122661 158 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Cbx4O55187 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.24□□□□□ -1.73
Cbx4O55187 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Cbx4O55187 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Cbx4O55187 Gm23171-201ENSMUST00000157159 264 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm25264-201ENSMUST00000158519 117 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm16318-201ENSMUST00000162402 601 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.24□□□□□ -1.73
Cbx4O55187 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Cbx4O55187 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Cbx4O55187 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Cbx4O55187 Gm27883-201ENSMUST00000183941 102 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm3454-201ENSMUST00000185571 412 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Cbx4O55187 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cbx4O55187 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.24□□□□□ -1.73
Cbx4O55187 Gm36954-201ENSMUST00000195362 363 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm37836-201ENSMUST00000195875 175 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.24□□□□□ -1.73
Cbx4O55187 Gm43856-201ENSMUST00000197004 369 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm4734-201ENSMUST00000200117 777 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 AC116726.2-201ENSMUST00000217629 986 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm18557-201ENSMUST00000218710 433 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.24□□□□□ -1.73
Cbx4O55187 AC164297.5-201ENSMUST00000224365 198 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 AC130823.2-201ENSMUST00000226169 290 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cbx4O55187 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Cbx4O55187 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Cbx4O55187 Gm24150-201ENSMUST00000082759 104 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm25699-201ENSMUST00000082896 167 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Cbx4O55187 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Cbx4O55187 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Cbx4O55187 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Cbx4O55187 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cbx4O55187 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Cbx4O55187 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cbx4O55187 AC124426.1-203ENSMUST00000221814 1362 ntBASIC4.24□□□□□ -1.73
Cbx4O55187 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cbx4O55187 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cbx4O55187 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Cbx4O55187 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cbx4O55187 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Cbx4O55187 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cbx4O55187 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cbx4O55187 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cbx4O55187 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cbx4O55187 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cbx4O55187 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cbx4O55187 Gm19074-201ENSMUST00000218915 1429 ntBASIC4.23□□□□□ -1.73
Cbx4O55187 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cbx4O55187 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Cbx4O55187 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cbx4O55187 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms