Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm5073-201ENSMUST00000118222 820 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm13082-201ENSMUST00000118877 561 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm14736-201ENSMUST00000121470 336 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm14129-201ENSMUST00000122436 291 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm24534-201ENSMUST00000157949 291 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm22136-201ENSMUST00000158751 268 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm42663-201ENSMUST00000199883 351 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm44060-201ENSMUST00000204440 410 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm45173-201ENSMUST00000206819 305 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm46223-201ENSMUST00000215196 675 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 AC168056.2-201ENSMUST00000223591 269 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm22508-201ENSMUST00000082772 110 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Mir19a-201ENSMUST00000083482 82 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Pcdh1F7BJK1 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 AC158388.2-201ENSMUST00000223665 1314 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm22834-201ENSMUST00000102021 79 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm23593-201ENSMUST00000104309 120 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm15010-201ENSMUST00000117153 407 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm4989-201ENSMUST00000118711 749 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm14669-201ENSMUST00000118841 250 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm14046-201ENSMUST00000119389 509 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm13787-201ENSMUST00000120422 168 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm16179-201ENSMUST00000120685 373 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm23224-201ENSMUST00000158122 271 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Scarna13-201ENSMUST00000158164 275 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm22518-201ENSMUST00000158267 68 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm16038-201ENSMUST00000159317 193 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm15900-201ENSMUST00000161584 342 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Mir5110-201ENSMUST00000175537 87 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Mir6382-201ENSMUST00000184055 110 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm18505-201ENSMUST00000187360 790 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm28615-201ENSMUST00000187527 482 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm38098-201ENSMUST00000194115 241 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm37495-201ENSMUST00000194590 264 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm37445-201ENSMUST00000195318 242 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm44261-201ENSMUST00000203337 209 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 CT030170.4-202ENSMUST00000221109 540 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 AC114572.1-201ENSMUST00000227262 300 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Mir20a-201ENSMUST00000083508 107 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.73□□□□□ -1.65
Pcdh1F7BJK1 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms