Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
Upk3aQ9JKX8 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm14037-201ENSMUST00000120576 313 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm3851-201ENSMUST00000168653 318 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm5473-201ENSMUST00000179326 642 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm36934-201ENSMUST00000192007 306 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm38330-201ENSMUST00000192743 959 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm37684-201ENSMUST00000192779 355 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm44349-201ENSMUST00000197048 123 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Trdv3-201ENSMUST00000198551 309 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm42926-201ENSMUST00000200496 697 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm4501-201ENSMUST00000207330 551 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm4558-201ENSMUST00000207886 521 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm4528-201ENSMUST00000207905 551 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm17989-201ENSMUST00000211543 412 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm45735-201ENSMUST00000212779 319 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 CT030194.1-201ENSMUST00000225507 532 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Upk3aQ9JKX8 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Mir92b-201ENSMUST00000102300 83 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm12873-201ENSMUST00000119988 422 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm14986-201ENSMUST00000121262 1002 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm26276-201ENSMUST00000157099 109 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm24059-201ENSMUST00000157493 312 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm22890-201ENSMUST00000158642 144 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Atp2b4-208ENSMUST00000167348 243 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm9613-201ENSMUST00000171662 196 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm20399-201ENSMUST00000174652 132 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm18415-201ENSMUST00000177464 647 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm5829-201ENSMUST00000191383 351 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm37343-201ENSMUST00000192542 111 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm37111-201ENSMUST00000193250 634 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm37005-201ENSMUST00000193281 1164 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm20177-201ENSMUST00000203705 334 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm44871-201ENSMUST00000207821 497 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Gm8942-201ENSMUST00000217892 400 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Upk3aQ9JKX8 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.59□□□□□ -1.84
Upk3aQ9JKX8 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Upk3aQ9JKX8 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Upk3aQ9JKX8 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Upk3aQ9JKX8 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Upk3aQ9JKX8 Gm11869-201ENSMUST00000118701 329 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms