Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim13Q9CYB0 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
Trim13Q9CYB0 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.06□□□□□ -1.6
Trim13Q9CYB0 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm22371-201ENSMUST00000104588 130 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm7079-201ENSMUST00000119726 171 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm14655-201ENSMUST00000120124 578 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm14876-201ENSMUST00000120795 327 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm25706-201ENSMUST00000157828 247 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm22538-201ENSMUST00000158169 299 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm25660-201ENSMUST00000158470 104 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm23115-201ENSMUST00000158480 108 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm17081-201ENSMUST00000167363 478 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm3084-201ENSMUST00000169967 598 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm25065-201ENSMUST00000177914 132 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm25891-201ENSMUST00000180050 132 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm27585-201ENSMUST00000183717 199 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm27781-201ENSMUST00000185185 92 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm28974-201ENSMUST00000187893 231 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm28744-201ENSMUST00000189939 340 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm44083-201ENSMUST00000203114 337 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm44571-201ENSMUST00000208092 533 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm46997-201ENSMUST00000222108 217 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.05□□□□□ -1.6
Trim13Q9CYB0 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim13Q9CYB0 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm25213-201ENSMUST00000102388 113 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Mir292-201ENSMUST00000104847 82 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm15994-201ENSMUST00000118029 402 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm13772-201ENSMUST00000118431 317 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm11826-201ENSMUST00000118781 438 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm12494-201ENSMUST00000121684 521 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm12618-201ENSMUST00000121754 483 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm26101-201ENSMUST00000157246 105 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm24435-201ENSMUST00000157886 110 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm25643-201ENSMUST00000158874 103 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm3531-201ENSMUST00000162698 489 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm17109-201ENSMUST00000163985 358 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm10087-201ENSMUST00000167650 330 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Mir7082-201ENSMUST00000183526 92 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim13Q9CYB0 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm43392-201ENSMUST00000196560 434 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm18482-201ENSMUST00000202405 760 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm44125-201ENSMUST00000203068 448 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.04□□□□□ -1.6
Trim13Q9CYB0 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC5.04□□□□□ -1.6
Trim13Q9CYB0 Gm45439-201ENSMUST00000211723 359 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms