Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm24713-201ENSMUST00000178850 107 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm24137-201ENSMUST00000180055 79 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm25448-201ENSMUST00000180065 107 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm22391-201ENSMUST00000180356 79 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm29228-201ENSMUST00000185489 418 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm28255-201ENSMUST00000187101 694 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm32447-201ENSMUST00000194265 697 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm44060-201ENSMUST00000204440 410 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm44720-201ENSMUST00000206076 260 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 AC122905.2-201ENSMUST00000220325 269 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 CT030187.1-201ENSMUST00000220605 252 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Clp1Q99LI9 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm26228-201ENSMUST00000082512 107 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm25080-201ENSMUST00000082526 107 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm22741-201ENSMUST00000083438 165 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm25518-201ENSMUST00000083864 107 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Clp1Q99LI9 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm23948-201ENSMUST00000104030 132 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm9043-201ENSMUST00000119677 314 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm12872-201ENSMUST00000121835 320 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm23837-201ENSMUST00000122656 286 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm24784-201ENSMUST00000157640 62 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm24689-201ENSMUST00000157760 104 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm20526-201ENSMUST00000173416 158 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm28781-201ENSMUST00000185760 696 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm29307-201ENSMUST00000187367 696 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm29339-201ENSMUST00000189613 696 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm29407-201ENSMUST00000191468 696 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm9238-201ENSMUST00000196181 329 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm44409-201ENSMUST00000198810 166 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Clp1Q99LI9 AC152979.1-201ENSMUST00000218214 289 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm8158-201ENSMUST00000219220 465 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm8249-201ENSMUST00000219225 465 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm8112-201ENSMUST00000219637 465 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 AC126554.1-201ENSMUST00000222161 271 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Clp1Q99LI9 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Clp1Q99LI9 Gm37086-201ENSMUST00000193082 3452 ntBASIC5.82□□□□□ -1.48
Clp1Q99LI9 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm16128-201ENSMUST00000117855 626 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm6081-201ENSMUST00000134472 489 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm8121-201ENSMUST00000153583 499 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm23312-201ENSMUST00000158774 102 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm10105-201ENSMUST00000184601 270 ntBASIC5.81□□□□□ -1.48
Clp1Q99LI9 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC5.81□□□□□ -1.48
Clp1Q99LI9 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms