Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm28533-201ENSMUST00000186741 570 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm29038-201ENSMUST00000191543 678 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm37616-201ENSMUST00000193974 322 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm43115-201ENSMUST00000196244 160 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm42758-201ENSMUST00000202146 283 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm7838-201ENSMUST00000203221 1189 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm19761-201ENSMUST00000205372 391 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm45023-201ENSMUST00000207951 379 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm35262-201ENSMUST00000215133 267 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm5750-201ENSMUST00000218711 801 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm18120-201ENSMUST00000220079 511 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm5457-201ENSMUST00000022260 333 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 CT010506.2-201ENSMUST00000225618 183 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 AC107711.2-203ENSMUST00000227827 762 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm23627-201ENSMUST00000082459 107 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm22502-201ENSMUST00000082488 107 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm24149-201ENSMUST00000082757 107 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm25818-201ENSMUST00000083282 164 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Lims1Q99JW4 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.81□□□□□ -1.64
Lims1Q99JW4 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lims1Q99JW4 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lims1Q99JW4 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm13259-201ENSMUST00000120792 456 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm23318-201ENSMUST00000158000 108 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm25907-201ENSMUST00000158486 125 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm22951-201ENSMUST00000179471 107 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm26988-201ENSMUST00000183296 945 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm27796-201ENSMUST00000183863 261 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Npn2-202ENSMUST00000189275 235 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm38015-201ENSMUST00000193048 188 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Mir219c-201ENSMUST00000199860 60 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm44161-201ENSMUST00000203532 253 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm18011-201ENSMUST00000203717 565 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm18194-201ENSMUST00000210455 481 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm45422-201ENSMUST00000211476 246 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm45402-201ENSMUST00000211796 223 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm45814-201ENSMUST00000212646 775 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 CT025616.1-201ENSMUST00000221158 412 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm23508-201ENSMUST00000083079 72 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm4017-201ENSMUST00000084813 338 ntBASIC4.8□□□□□ -1.64
Lims1Q99JW4 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Lims1Q99JW4 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lims1Q99JW4 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lims1Q99JW4 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.79□□□□□ -1.64
Lims1Q99JW4 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.79□□□□□ -1.64
Lims1Q99JW4 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lims1Q99JW4 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Lims1Q99JW4 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Lims1Q99JW4 Gm23910-201ENSMUST00000104597 132 ntBASIC4.79□□□□□ -1.64
Lims1Q99JW4 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.79□□□□□ -1.64
Lims1Q99JW4 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lims1Q99JW4 Gm14520-201ENSMUST00000119258 387 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms