Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm14816-201ENSMUST00000117174 294 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm12118-201ENSMUST00000119766 532 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm11420-201ENSMUST00000120047 402 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm12808-201ENSMUST00000120597 404 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm3145-201ENSMUST00000188584 220 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm28769-201ENSMUST00000190176 615 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm28211-201ENSMUST00000190920 315 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Mir7116-201ENSMUST00000195956 70 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Igkv12-49-201ENSMUST00000197714 278 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm5288-201ENSMUST00000198323 1119 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Trav15d-3-201ENSMUST00000198604 167 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm43631-201ENSMUST00000202011 369 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm18850-201ENSMUST00000211578 388 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 AC154851.2-201ENSMUST00000222172 644 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 AC140393.2-201ENSMUST00000226894 943 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 AC119573.1-201ENSMUST00000227960 757 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 AC130547.1-201ENSMUST00000228079 1047 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm24623-201ENSMUST00000082616 194 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Snora70-201ENSMUST00000083047 137 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm22971-201ENSMUST00000083305 97 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.14□□□□□ -1.59
Ccdc9Q8VC31 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm14991-201ENSMUST00000119913 598 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Defa-ps13-201ENSMUST00000120695 204 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm9001-201ENSMUST00000121642 399 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Mir1898-201ENSMUST00000122643 83 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm22988-201ENSMUST00000122759 144 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm23534-201ENSMUST00000157539 97 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm20526-201ENSMUST00000173416 158 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm24811-201ENSMUST00000175313 100 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm5974-201ENSMUST00000181607 986 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm27543-201ENSMUST00000183562 177 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm27551-201ENSMUST00000184258 77 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm6445-201ENSMUST00000189515 1112 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm42566-201ENSMUST00000197120 643 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm36382-201ENSMUST00000198892 541 ntBASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Ccdc9Q8VC31 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms