Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm44779-201ENSMUST00000206937 708 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm45200-201ENSMUST00000207434 919 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC5.25□□□□□ -1.57
Ushbp1Q8R370 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm36927-201ENSMUST00000192504 1841 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm14909-201ENSMUST00000117853 351 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm6664-201ENSMUST00000119138 468 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm15452-201ENSMUST00000119877 240 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm13751-201ENSMUST00000120280 752 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm3111-201ENSMUST00000167426 490 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm18185-201ENSMUST00000186725 667 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm29038-201ENSMUST00000191543 678 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm37961-201ENSMUST00000192729 299 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm42896-201ENSMUST00000201249 1113 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm4501-201ENSMUST00000207330 551 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm4558-201ENSMUST00000207886 521 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm4528-201ENSMUST00000207905 551 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 AC152951.1-201ENSMUST00000218907 266 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Gm43886-201ENSMUST00000205039 2386 ntBASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ushbp1Q8R370 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm26384-201ENSMUST00000102183 110 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Snord66-201ENSMUST00000104051 75 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm22591-201ENSMUST00000104243 106 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Mir669d-2-201ENSMUST00000116854 86 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm23885-201ENSMUST00000122682 294 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm22395-201ENSMUST00000177427 96 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm6900-201ENSMUST00000178971 342 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm38098-201ENSMUST00000194115 241 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm17951-201ENSMUST00000198536 496 ntBASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.23□□□□□ -1.57
Ushbp1Q8R370 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms