Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.59□□□□□ -1.83
Ccdc28aQ8CEI3 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc28aQ8CEI3 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.59□□□□□ -1.83
Ccdc28aQ8CEI3 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.59□□□□□ -1.83
Ccdc28aQ8CEI3 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc28aQ8CEI3 Gm45796-201ENSMUST00000212483 114 ntBASIC3.59□□□□□ -1.83
Ccdc28aQ8CEI3 Gm18441-201ENSMUST00000223539 617 ntBASIC3.59□□□□□ -1.83
Ccdc28aQ8CEI3 AV026068-224ENSMUST00000224827 928 ntBASIC3.59□□□□□ -1.83
Ccdc28aQ8CEI3 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ccdc28aQ8CEI3 Gm10704-201ENSMUST00000098952 730 ntBASIC3.59□□□□□ -1.83
Ccdc28aQ8CEI3 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ccdc28aQ8CEI3 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc28aQ8CEI3 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.59□□□□□ -1.84
Ccdc28aQ8CEI3 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.84
Ccdc28aQ8CEI3 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.59□□□□□ -1.84
Ccdc28aQ8CEI3 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.59□□□□□ -1.84
Ccdc28aQ8CEI3 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Ccdc28aQ8CEI3 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Ccdc28aQ8CEI3 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm12739-201ENSMUST00000119769 382 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm14037-201ENSMUST00000120576 313 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm14926-201ENSMUST00000120650 508 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm13508-201ENSMUST00000121639 775 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm10357-201ENSMUST00000159886 264 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Mir6374-201ENSMUST00000184003 107 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm37239-201ENSMUST00000193510 141 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm38234-201ENSMUST00000195204 421 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm19243-201ENSMUST00000198592 269 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm24319-201ENSMUST00000083389 107 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc28aQ8CEI3 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm22272-201ENSMUST00000104039 134 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm12568-201ENSMUST00000117362 624 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm13379-201ENSMUST00000118053 621 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm11913-201ENSMUST00000119094 336 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm13366-201ENSMUST00000122198 970 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm23112-201ENSMUST00000158606 125 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm10075-201ENSMUST00000162030 545 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm27315-201ENSMUST00000183977 154 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm28148-201ENSMUST00000186924 697 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm37164-201ENSMUST00000192809 637 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm38283-201ENSMUST00000193041 695 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm36985-201ENSMUST00000195595 379 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm36382-201ENSMUST00000198892 541 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm44624-201ENSMUST00000208700 2278 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm45814-201ENSMUST00000212646 775 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 CT009765.2-201ENSMUST00000221331 392 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 AC154510.1-201ENSMUST00000223925 737 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Gm25480-201ENSMUST00000083217 133 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Ccdc28aQ8CEI3 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ccdc28aQ8CEI3 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ccdc28aQ8CEI3 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.56□□□□□ -1.84
Ccdc28aQ8CEI3 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ccdc28aQ8CEI3 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ccdc28aQ8CEI3 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms