Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC7.13□□□□□ -1.27
Trim35Q8C006 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim35Q8C006 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim35Q8C006 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim35Q8C006 Gm25593-201ENSMUST00000102272 96 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim35Q8C006 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Trim35Q8C006 Gm12850-201ENSMUST00000119210 436 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Gm13900-201ENSMUST00000119402 498 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Gm22025-201ENSMUST00000122734 302 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim35Q8C006 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC7.13□□□□□ -1.27
Trim35Q8C006 Gm25623-201ENSMUST00000157216 108 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Gm16113-201ENSMUST00000159629 372 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Gm26466-201ENSMUST00000179615 79 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Pea15b-201ENSMUST00000182806 387 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Mir7058-201ENSMUST00000184637 75 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Mir6403-201ENSMUST00000185007 129 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC7.13□□□□□ -1.27
Trim35Q8C006 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim35Q8C006 Mir7657-201ENSMUST00000196051 57 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Ighv8-15-201ENSMUST00000197770 294 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Gm2089-201ENSMUST00000218294 479 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC7.13□□□□□ -1.27
Trim35Q8C006 AC120002.1-201ENSMUST00000218456 331 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC7.13□□□□□ -1.27
Trim35Q8C006 Mir455-201ENSMUST00000093594 82 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim35Q8C006 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim35Q8C006 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim35Q8C006 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim35Q8C006 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim35Q8C006 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim35Q8C006 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim35Q8C006 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim35Q8C006 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim35Q8C006 Gm43834-201ENSMUST00000197097 4830 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Gm4073-201ENSMUST00000176792 3500 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.13□□□□□ -1.27
Trim35Q8C006 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Trim35Q8C006 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC7.12□□□□□ -1.27
Trim35Q8C006 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Trim35Q8C006 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim35Q8C006 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Trim35Q8C006 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Trim35Q8C006 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim35Q8C006 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim35Q8C006 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim35Q8C006 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm24116-201ENSMUST00000103975 107 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm25631-201ENSMUST00000104390 130 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm14894-201ENSMUST00000117170 270 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm14073-201ENSMUST00000117344 381 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm16186-201ENSMUST00000120132 216 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm15044-201ENSMUST00000120703 598 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm13210-201ENSMUST00000121483 273 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm15065-201ENSMUST00000121699 273 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm25961-201ENSMUST00000157174 135 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm26049-201ENSMUST00000157313 108 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm25555-201ENSMUST00000158078 111 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm25950-201ENSMUST00000175331 100 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm27026-201ENSMUST00000183003 892 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm37449-201ENSMUST00000193016 270 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm18658-201ENSMUST00000195558 270 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm43724-201ENSMUST00000197516 226 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.12□□□□□ -1.27
Trim35Q8C006 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC7.12□□□□□ -1.27
Trim35Q8C006 AC091783.5-201ENSMUST00000224928 671 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm22504-201ENSMUST00000082963 139 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm26495-201ENSMUST00000083152 137 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Mir342-201ENSMUST00000083502 99 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 n-R5s54-201ENSMUST00000083837 112 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim35Q8C006 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim35Q8C006 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim35Q8C006 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim35Q8C006 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim35Q8C006 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Trim35Q8C006 AC152159.1-201ENSMUST00000226719 2769 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.12□□□□□ -1.27
Trim35Q8C006 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
Trim35Q8C006 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim35Q8C006 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim35Q8C006 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim35Q8C006 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trim35Q8C006 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Trim35Q8C006 Gm42492-201ENSMUST00000195780 2915 ntBASIC7.11□□□□□ -1.27
Trim35Q8C006 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim35Q8C006 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim35Q8C006 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim35Q8C006 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim35Q8C006 Gm28634-201ENSMUST00000191087 2613 ntBASIC7.11□□□□□ -1.27
Trim35Q8C006 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Trim35Q8C006 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim35Q8C006 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Trim35Q8C006 Gm12617-201ENSMUST00000121268 381 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms