Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.73□□□□□ -1.65
Usp47Q8BY87 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Usp47Q8BY87 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Usp47Q8BY87 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.73□□□□□ -1.65
Usp47Q8BY87 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Usp47Q8BY87 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Usp47Q8BY87 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC4.73□□□□□ -1.65
Usp47Q8BY87 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Usp47Q8BY87 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Usp47Q8BY87 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Usp47Q8BY87 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
Usp47Q8BY87 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.72□□□□□ -1.65
Usp47Q8BY87 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Usp47Q8BY87 Gm22023-201ENSMUST00000104354 130 ntBASIC4.72□□□□□ -1.65
Usp47Q8BY87 Gm15190-201ENSMUST00000120855 276 ntBASIC4.72□□□□□ -1.65
Usp47Q8BY87 Gm12858-201ENSMUST00000121913 208 ntBASIC4.72□□□□□ -1.65
Usp47Q8BY87 Gm7855-201ENSMUST00000137737 687 ntBASIC4.72□□□□□ -1.65
Usp47Q8BY87 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.72□□□□□ -1.65
Usp47Q8BY87 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Usp47Q8BY87 Gm24138-201ENSMUST00000157572 114 ntBASIC4.72□□□□□ -1.65
Usp47Q8BY87 Gm26045-201ENSMUST00000157862 97 ntBASIC4.72□□□□□ -1.65
Usp47Q8BY87 Gm27538-201ENSMUST00000185065 294 ntBASIC4.72□□□□□ -1.65
Usp47Q8BY87 Gm20162-201ENSMUST00000193629 871 ntBASIC4.72□□□□□ -1.65
Usp47Q8BY87 Gm37085-201ENSMUST00000193780 196 ntBASIC4.72□□□□□ -1.65
Usp47Q8BY87 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.72□□□□□ -1.65
Usp47Q8BY87 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC4.72□□□□□ -1.65
Usp47Q8BY87 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Usp47Q8BY87 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Usp47Q8BY87 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Usp47Q8BY87 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Usp47Q8BY87 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
Usp47Q8BY87 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
Usp47Q8BY87 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Usp47Q8BY87 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
Usp47Q8BY87 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Usp47Q8BY87 Gm25407-201ENSMUST00000104102 134 ntBASIC4.71□□□□□ -1.66
Usp47Q8BY87 Gm13121-201ENSMUST00000120637 632 ntBASIC4.71□□□□□ -1.66
Usp47Q8BY87 Gm25456-201ENSMUST00000157952 109 ntBASIC4.71□□□□□ -1.66
Usp47Q8BY87 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Usp47Q8BY87 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC4.71□□□□□ -1.66
Usp47Q8BY87 Gm18529-201ENSMUST00000193025 1257 ntBASIC4.71□□□□□ -1.66
Usp47Q8BY87 Gm43899-201ENSMUST00000203675 246 ntBASIC4.71□□□□□ -1.66
Usp47Q8BY87 Gm43932-201ENSMUST00000204499 52 ntBASIC4.71□□□□□ -1.66
Usp47Q8BY87 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Usp47Q8BY87 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Usp47Q8BY87 Gm4052-201ENSMUST00000220890 451 ntBASIC4.71□□□□□ -1.66
Usp47Q8BY87 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.71□□□□□ -1.66
Usp47Q8BY87 AC154515.2-201ENSMUST00000226093 406 ntBASIC4.71□□□□□ -1.66
Usp47Q8BY87 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.71□□□□□ -1.66
Usp47Q8BY87 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.71□□□□□ -1.66
Usp47Q8BY87 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Usp47Q8BY87 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Usp47Q8BY87 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.71□□□□□ -1.66
Usp47Q8BY87 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.71□□□□□ -1.66
Usp47Q8BY87 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Usp47Q8BY87 Gm14912-201ENSMUST00000120166 1773 ntBASIC4.7□□□□□ -1.66
Usp47Q8BY87 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Usp47Q8BY87 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Usp47Q8BY87 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC4.7□□□□□ -1.66
Usp47Q8BY87 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC4.7□□□□□ -1.66
Usp47Q8BY87 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.7□□□□□ -1.66
Usp47Q8BY87 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC4.7□□□□□ -1.66
Usp47Q8BY87 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Usp47Q8BY87 Mir7k-201ENSMUST00000184115 110 ntBASIC4.7□□□□□ -1.66
Usp47Q8BY87 Mir6914-201ENSMUST00000184999 69 ntBASIC4.7□□□□□ -1.66
Usp47Q8BY87 Gm44343-201ENSMUST00000196702 90 ntBASIC4.7□□□□□ -1.66
Usp47Q8BY87 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.7□□□□□ -1.66
Usp47Q8BY87 CT009604.2-201ENSMUST00000225531 377 ntBASIC4.7□□□□□ -1.66
Usp47Q8BY87 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Usp47Q8BY87 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Usp47Q8BY87 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Usp47Q8BY87 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Usp47Q8BY87 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.7□□□□□ -1.66
Usp47Q8BY87 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Usp47Q8BY87 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC4.69□□□□□ -1.66
Usp47Q8BY87 Gm12568-201ENSMUST00000117362 624 ntBASIC4.69□□□□□ -1.66
Usp47Q8BY87 Gm12261-201ENSMUST00000117499 645 ntBASIC4.69□□□□□ -1.66
Usp47Q8BY87 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.69□□□□□ -1.66
Usp47Q8BY87 Gm13379-201ENSMUST00000118053 621 ntBASIC4.69□□□□□ -1.66
Usp47Q8BY87 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.69□□□□□ -1.66
Usp47Q8BY87 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.69□□□□□ -1.66
Usp47Q8BY87 Gm14101-201ENSMUST00000121502 473 ntBASIC4.69□□□□□ -1.66
Usp47Q8BY87 Gm10075-201ENSMUST00000162030 545 ntBASIC4.69□□□□□ -1.66
Usp47Q8BY87 Gm3123-201ENSMUST00000163480 480 ntBASIC4.69□□□□□ -1.66
Usp47Q8BY87 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC4.69□□□□□ -1.66
Usp47Q8BY87 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.69□□□□□ -1.66
Usp47Q8BY87 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.69□□□□□ -1.66
Usp47Q8BY87 Gm8319-201ENSMUST00000205708 641 ntBASIC4.69□□□□□ -1.66
Usp47Q8BY87 Gm25581-201ENSMUST00000083410 164 ntBASIC4.69□□□□□ -1.66
Usp47Q8BY87 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Usp47Q8BY87 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Usp47Q8BY87 Gm42585-201ENSMUST00000198731 4020 ntBASIC4.69□□□□□ -1.66
Usp47Q8BY87 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Usp47Q8BY87 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Usp47Q8BY87 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Usp47Q8BY87 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Usp47Q8BY87 Gm13122-201ENSMUST00000118380 453 ntBASIC4.68□□□□□ -1.66
Usp47Q8BY87 Gm11708-201ENSMUST00000119530 832 ntBASIC4.68□□□□□ -1.66
Usp47Q8BY87 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.68□□□□□ -1.66
Usp47Q8BY87 Gm21990-201ENSMUST00000124692 383 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms