Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 AC166830.1-201ENSMUST00000224201 533 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 AC144798.1-201ENSMUST00000228120 391 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm6177-201ENSMUST00000085589 465 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm11313-201ENSMUST00000118779 432 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm12016-201ENSMUST00000119079 681 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm14651-201ENSMUST00000147192 442 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm25966-201ENSMUST00000157169 117 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm22816-201ENSMUST00000157450 117 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Trbv10-201ENSMUST00000168322 289 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm17054-201ENSMUST00000169811 259 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm19224-201ENSMUST00000190477 793 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm44990-201ENSMUST00000203922 217 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm45226-201ENSMUST00000206602 288 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm7034-201ENSMUST00000218638 645 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm24928-201ENSMUST00000083399 107 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm25897-201ENSMUST00000083709 107 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.18□□□□□ -1.58
Ddx55Q6ZPL9 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Gm5384-201ENSMUST00000120313 463 ntBASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Gm14784-201ENSMUST00000121604 663 ntBASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Gm12103-201ENSMUST00000121892 362 ntBASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Gm25058-201ENSMUST00000157365 128 ntBASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Gm8790-201ENSMUST00000194108 322 ntBASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Gm43142-201ENSMUST00000198670 361 ntBASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Gm44277-201ENSMUST00000205128 649 ntBASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Gm44871-201ENSMUST00000207821 497 ntBASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Gm18320-201ENSMUST00000211304 595 ntBASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 AC159263.3-201ENSMUST00000223434 460 ntBASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 AC160999.1-201ENSMUST00000225675 810 ntBASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 n-R5s162-201ENSMUST00000082581 119 ntBASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Gm24490-201ENSMUST00000083803 98 ntBASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx55Q6ZPL9 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms