Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm13172-201ENSMUST00000118685 256 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm12878-201ENSMUST00000118744 332 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm14359-201ENSMUST00000118883 424 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm23463-201ENSMUST00000122468 99 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm9498-201ENSMUST00000140849 291 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm24690-201ENSMUST00000157759 97 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm10177-201ENSMUST00000160052 444 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm22859-201ENSMUST00000174978 122 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Mir3066-201ENSMUST00000175296 83 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm20612-201ENSMUST00000176318 236 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm7094-201ENSMUST00000178379 366 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm24520-201ENSMUST00000179510 110 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm8151-201ENSMUST00000184817 871 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm29320-201ENSMUST00000185235 615 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm8392-201ENSMUST00000185647 835 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm29179-202ENSMUST00000186138 615 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm29448-201ENSMUST00000186675 615 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm29314-201ENSMUST00000186800 615 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm28253-202ENSMUST00000187971 615 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm29169-201ENSMUST00000189835 615 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm43794-201ENSMUST00000200971 692 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm43578-201ENSMUST00000201250 459 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm44818-201ENSMUST00000206608 358 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm44879-201ENSMUST00000207007 503 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm18587-201ENSMUST00000213736 841 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 AC153971.2-201ENSMUST00000214553 777 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 AC154556.1-201ENSMUST00000224587 885 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 AC107711.2-203ENSMUST00000227827 762 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm44424-201ENSMUST00000203438 1826 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.73□□□□□ -1.65
Rnf220Q6PDX6 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm26078-201ENSMUST00000104067 128 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm7834-201ENSMUST00000117560 437 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm11822-201ENSMUST00000119177 415 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm5060-201ENSMUST00000120072 599 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm23206-201ENSMUST00000122720 184 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm24687-201ENSMUST00000157758 241 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm24435-201ENSMUST00000157886 110 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm16318-201ENSMUST00000162402 601 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Cfap61-214ENSMUST00000167179 183 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Mir5098-201ENSMUST00000175320 82 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm5139-201ENSMUST00000175943 249 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm27653-201ENSMUST00000185037 136 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm28283-201ENSMUST00000185509 178 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm28385-201ENSMUST00000185671 292 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Ighv3-7-201ENSMUST00000193370 348 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm42758-201ENSMUST00000202146 283 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm44074-201ENSMUST00000204562 337 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm45232-201ENSMUST00000207811 162 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm20039-201ENSMUST00000210329 394 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 AC159619.2-201ENSMUST00000222924 401 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 CT030135.1-201ENSMUST00000223760 570 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 AC174797.2-203ENSMUST00000224017 716 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 AC158981.3-202ENSMUST00000228906 523 ntBASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Rnf220Q6PDX6 Gm8526-201ENSMUST00000079153 475 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms