Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Sh3rf1Q69ZI1 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.46□□□□□ -1.53
Sh3rf1Q69ZI1 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Sh3rf1Q69ZI1 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Sh3rf1Q69ZI1 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Sh3rf1Q69ZI1 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Sh3rf1Q69ZI1 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Sh3rf1Q69ZI1 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm13887-201ENSMUST00000119009 344 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm14815-201ENSMUST00000120060 488 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm13259-201ENSMUST00000120792 456 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm23545-201ENSMUST00000158205 104 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm26172-201ENSMUST00000158421 134 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm23806-201ENSMUST00000175157 109 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm23864-201ENSMUST00000177607 107 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm22420-201ENSMUST00000178795 126 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm28017-201ENSMUST00000183434 126 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm29196-201ENSMUST00000189239 618 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm29334-201ENSMUST00000190334 357 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm28098-201ENSMUST00000191361 699 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm43724-201ENSMUST00000197516 226 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm43914-201ENSMUST00000203592 594 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm44132-201ENSMUST00000205142 151 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm18487-201ENSMUST00000215826 878 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Sh3rf1Q69ZI1 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm43326-201ENSMUST00000198459 1638 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm23839-201ENSMUST00000116957 109 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm11197-201ENSMUST00000145158 839 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm3362-201ENSMUST00000148102 466 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm22519-201ENSMUST00000158270 178 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Mir3080-201ENSMUST00000175010 79 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm23144-201ENSMUST00000180226 107 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm8941-201ENSMUST00000181451 899 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Mir6412-201ENSMUST00000184477 97 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm44214-201ENSMUST00000204153 606 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm29754-201ENSMUST00000206269 358 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 AC122225.1-201ENSMUST00000215641 369 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm20102-201ENSMUST00000222445 220 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Snord68-201ENSMUST00000082516 86 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Sh3rf1Q69ZI1 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.44□□□□□ -1.54
Sh3rf1Q69ZI1 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms