Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC6.56□□□□□ -1.36
Col17a1Q07563 Gm27588-201ENSMUST00000185096 263 ntBASIC6.56□□□□□ -1.36
Col17a1Q07563 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC6.56□□□□□ -1.36
Col17a1Q07563 Gm43848-201ENSMUST00000198060 1247 ntBASIC6.56□□□□□ -1.36
Col17a1Q07563 Gm44966-201ENSMUST00000208096 157 ntBASIC6.56□□□□□ -1.36
Col17a1Q07563 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Col17a1Q07563 Gm3829-201ENSMUST00000222362 619 ntBASIC6.56□□□□□ -1.36
Col17a1Q07563 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col17a1Q07563 AV026068-237ENSMUST00000226075 572 ntBASIC6.56□□□□□ -1.36
Col17a1Q07563 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col17a1Q07563 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Col17a1Q07563 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col17a1Q07563 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col17a1Q07563 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col17a1Q07563 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Col17a1Q07563 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col17a1Q07563 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col17a1Q07563 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col17a1Q07563 Gm10933-201ENSMUST00000221891 1861 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC6.55□□□□□ -1.36
Col17a1Q07563 Gm36944-201ENSMUST00000192257 2759 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col17a1Q07563 Gm12636-201ENSMUST00000117395 624 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Gm15060-201ENSMUST00000119550 948 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Gm13751-201ENSMUST00000120280 752 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Gm22339-201ENSMUST00000157718 62 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Gm26045-201ENSMUST00000157862 97 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC6.55□□□□□ -1.36
Col17a1Q07563 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.55□□□□□ -1.36
Col17a1Q07563 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col17a1Q07563 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Gm18482-201ENSMUST00000202405 760 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col17a1Q07563 Gm18585-201ENSMUST00000215197 556 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.55□□□□□ -1.36
Col17a1Q07563 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Gm23927-201ENSMUST00000082466 215 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Gm10161-201ENSMUST00000091506 204 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Gm24817-201ENSMUST00000093672 105 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col17a1Q07563 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col17a1Q07563 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col17a1Q07563 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC6.55□□□□□ -1.36
Col17a1Q07563 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col17a1Q07563 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Col17a1Q07563 AC122357.1-201ENSMUST00000221652 1515 ntBASIC6.55□□□□□ -1.36
Col17a1Q07563 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col17a1Q07563 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col17a1Q07563 Gm12691-201ENSMUST00000120186 456 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 Gm13080-201ENSMUST00000120556 420 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 Gm13508-201ENSMUST00000121639 775 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC6.54□□□□□ -1.36
Col17a1Q07563 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC6.54□□□□□ -1.36
Col17a1Q07563 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC6.54□□□□□ -1.36
Col17a1Q07563 Gm22314-201ENSMUST00000158007 281 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 Gm22857-201ENSMUST00000174969 134 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 Zfp950-206ENSMUST00000178819 171 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 Gm37001-201ENSMUST00000193377 190 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 Gm37889-201ENSMUST00000194174 251 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 Gm42428-201ENSMUST00000198677 302 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 AC153954.2-201ENSMUST00000213811 287 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 AC159244.1-201ENSMUST00000220964 594 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 AC153794.2-201ENSMUST00000222650 550 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 AC154598.1-201ENSMUST00000227079 347 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 AC119573.1-201ENSMUST00000227960 757 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col17a1Q07563 Gm23510-201ENSMUST00000083083 163 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
Col17a1Q07563 Gm43317-201ENSMUST00000197924 2544 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 AC122408.2-201ENSMUST00000217901 1391 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col17a1Q07563 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col17a1Q07563 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col17a1Q07563 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col17a1Q07563 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col17a1Q07563 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col17a1Q07563 AC121997.2-203ENSMUST00000228613 4192 ntBASIC6.54□□□□□ -1.36
Col17a1Q07563 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col17a1Q07563 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col17a1Q07563 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Col17a1Q07563 Mir292-201ENSMUST00000104847 82 ntBASIC6.53□□□□□ -1.36
Col17a1Q07563 Gm15125-201ENSMUST00000116185 800 ntBASIC6.53□□□□□ -1.36
Col17a1Q07563 Gm11322-201ENSMUST00000118095 435 ntBASIC6.53□□□□□ -1.36
Col17a1Q07563 Gm15785-201ENSMUST00000119145 694 ntBASIC6.53□□□□□ -1.36
Col17a1Q07563 Gm12704-201ENSMUST00000119789 464 ntBASIC6.53□□□□□ -1.36
Col17a1Q07563 Gm12368-201ENSMUST00000122251 434 ntBASIC6.53□□□□□ -1.36
Col17a1Q07563 Gm25052-201ENSMUST00000122661 158 ntBASIC6.53□□□□□ -1.36
Col17a1Q07563 Gm26214-201ENSMUST00000158581 107 ntBASIC6.53□□□□□ -1.36
Col17a1Q07563 Gm8282-201ENSMUST00000187559 483 ntBASIC6.53□□□□□ -1.36
Col17a1Q07563 Gm38231-201ENSMUST00000192030 347 ntBASIC6.53□□□□□ -1.36
Col17a1Q07563 Gm8747-201ENSMUST00000195392 751 ntBASIC6.53□□□□□ -1.36
Col17a1Q07563 Gm43090-201ENSMUST00000202459 314 ntBASIC6.53□□□□□ -1.36
Col17a1Q07563 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC6.53□□□□□ -1.36
Col17a1Q07563 Gm2544-201ENSMUST00000222702 756 ntBASIC6.53□□□□□ -1.36
Col17a1Q07563 AC192333.1-201ENSMUST00000224573 376 ntBASIC6.53□□□□□ -1.36
Col17a1Q07563 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 142.9 ms