Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Snord82-201ENSMUST00000082889 70 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm26130-201ENSMUST00000083171 138 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm25187-201ENSMUST00000083906 133 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Col9a1Q05722 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col9a1Q05722 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col9a1Q05722 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col9a1Q05722 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col9a1Q05722 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col9a1Q05722 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col9a1Q05722 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col9a1Q05722 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Col9a1Q05722 AC113059.3-201ENSMUST00000217423 2777 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col9a1Q05722 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm37226-201ENSMUST00000191644 3255 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col9a1Q05722 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col9a1Q05722 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.17□□□□□ -1.42
Col9a1Q05722 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col9a1Q05722 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col9a1Q05722 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col9a1Q05722 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col9a1Q05722 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col9a1Q05722 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Col9a1Q05722 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Col9a1Q05722 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col9a1Q05722 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm24886-201ENSMUST00000104384 123 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm16242-201ENSMUST00000117741 334 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm14870-201ENSMUST00000118414 156 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm15206-201ENSMUST00000119143 454 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm12704-201ENSMUST00000119789 464 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm15244-201ENSMUST00000121122 130 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm24596-201ENSMUST00000122504 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm14562-201ENSMUST00000129885 543 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm15905-201ENSMUST00000137042 298 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm15501-202ENSMUST00000140687 625 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm23232-201ENSMUST00000157300 105 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm23327-201ENSMUST00000157420 78 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm23137-201ENSMUST00000157559 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm25520-201ENSMUST00000158389 118 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm25211-201ENSMUST00000177553 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm24540-201ENSMUST00000177627 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm25256-201ENSMUST00000177746 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm22822-201ENSMUST00000177941 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Rnu6-201ENSMUST00000178023 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm25245-201ENSMUST00000178139 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm24753-201ENSMUST00000178183 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm25829-201ENSMUST00000178275 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm22092-201ENSMUST00000178290 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm24486-201ENSMUST00000178420 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm23217-201ENSMUST00000178482 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm26245-201ENSMUST00000178491 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm24019-201ENSMUST00000178620 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm23610-201ENSMUST00000178659 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm23092-201ENSMUST00000178688 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm25709-201ENSMUST00000178844 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm25547-201ENSMUST00000178877 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm25312-201ENSMUST00000178972 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm24722-201ENSMUST00000179017 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm22969-201ENSMUST00000179018 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm25101-201ENSMUST00000179057 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm26378-201ENSMUST00000179093 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm24873-201ENSMUST00000179101 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm23934-201ENSMUST00000179111 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm22623-201ENSMUST00000179244 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm26243-201ENSMUST00000179260 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm25737-201ENSMUST00000179274 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm22618-201ENSMUST00000179376 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm24182-201ENSMUST00000179419 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm24242-201ENSMUST00000179440 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm25064-201ENSMUST00000179535 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm26295-201ENSMUST00000179690 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm23712-201ENSMUST00000179713 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm22823-201ENSMUST00000179754 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm22360-201ENSMUST00000179775 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm24978-201ENSMUST00000179782 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm24967-201ENSMUST00000179791 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm25173-201ENSMUST00000179794 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm24870-201ENSMUST00000179897 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm22288-201ENSMUST00000179904 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm22645-201ENSMUST00000180010 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm24565-201ENSMUST00000180099 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm23805-201ENSMUST00000180129 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm23512-201ENSMUST00000180237 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm25327-201ENSMUST00000180263 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm26058-201ENSMUST00000180294 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 Gm22418-201ENSMUST00000180326 107 ntBASIC6.17□□□□□ -1.42
Col9a1Q05722 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms