Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm24534-201ENSMUST00000157949 291 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Gm22211-201ENSMUST00000158097 156 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Gm2343-201ENSMUST00000161177 1042 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC5.19□□□□□ -1.58
Sox9Q04887 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sox9Q04887 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox9Q04887 Gm28974-201ENSMUST00000187893 231 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sox9Q04887 Gm37353-201ENSMUST00000194497 313 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Gm18971-201ENSMUST00000197240 374 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Gm43405-201ENSMUST00000198642 337 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Gm44465-201ENSMUST00000199536 114 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sox9Q04887 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC5.19□□□□□ -1.58
Sox9Q04887 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox9Q04887 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.19□□□□□ -1.58
Sox9Q04887 AL662807.1-201ENSMUST00000224183 126 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 AC161758.1-201ENSMUST00000226123 310 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Sox9Q04887 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox9Q04887 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Sox9Q04887 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Sox9Q04887 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox9Q04887 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox9Q04887 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
Sox9Q04887 Gm23455-201ENSMUST00000083331 100 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Gm24765-201ENSMUST00000083691 103 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Sox9Q04887 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox9Q04887 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox9Q04887 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox9Q04887 Gm6757-201ENSMUST00000189810 1706 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox9Q04887 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox9Q04887 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.19□□□□□ -1.58
Sox9Q04887 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Sox9Q04887 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Sox9Q04887 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox9Q04887 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Sox9Q04887 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Sox9Q04887 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.19□□□□□ -1.58
Sox9Q04887 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.19□□□□□ -1.58
Sox9Q04887 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox9Q04887 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox9Q04887 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
Sox9Q04887 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sox9Q04887 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox9Q04887 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox9Q04887 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Sox9Q04887 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox9Q04887 Gm23133-201ENSMUST00000104255 135 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.18□□□□□ -1.58
Sox9Q04887 Gm7312-201ENSMUST00000118798 469 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Gm14835-201ENSMUST00000119039 315 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Gm12935-201ENSMUST00000119352 246 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Gm22345-201ENSMUST00000122644 107 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox9Q04887 Gm22236-201ENSMUST00000157093 106 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Gm6632-201ENSMUST00000168425 954 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Mir7022-201ENSMUST00000183749 61 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Gm28389-201ENSMUST00000190090 697 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Gm29389-201ENSMUST00000191562 352 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Gm38329-201ENSMUST00000193473 427 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Gm43114-201ENSMUST00000198298 343 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Gm18644-201ENSMUST00000211458 815 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Gm4921-201ENSMUST00000219804 992 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 AC160958.1-201ENSMUST00000224833 368 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Sox9Q04887 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Sox9Q04887 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Sox9Q04887 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Sox9Q04887 n-R5s37-201ENSMUST00000082533 118 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Gm25260-201ENSMUST00000083053 134 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox9Q04887 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox9Q04887 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox9Q04887 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox9Q04887 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox9Q04887 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox9Q04887 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox9Q04887 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.18□□□□□ -1.58
Sox9Q04887 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox9Q04887 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.17□□□□□ -1.58
Sox9Q04887 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms