Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a1Q04857 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
Col6a1Q04857 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a1Q04857 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a1Q04857 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a1Q04857 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a1Q04857 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a1Q04857 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm11633-201ENSMUST00000118176 444 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm11890-201ENSMUST00000119585 417 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm22208-201ENSMUST00000122658 110 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm22519-201ENSMUST00000158270 178 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm26170-201ENSMUST00000158419 148 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm25902-201ENSMUST00000158493 318 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm25243-201ENSMUST00000174912 207 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm23648-201ENSMUST00000180301 107 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm9569-201ENSMUST00000187492 787 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm5734-201ENSMUST00000189787 913 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm37336-202ENSMUST00000193705 468 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm45387-201ENSMUST00000209792 632 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm22456-201ENSMUST00000082578 125 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm26056-201ENSMUST00000083043 104 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm23506-201ENSMUST00000083077 107 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col6a1Q04857 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Col6a1Q04857 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.77□□□□□ -1.49
Col6a1Q04857 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a1Q04857 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col6a1Q04857 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a1Q04857 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col6a1Q04857 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Col6a1Q04857 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a1Q04857 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a1Q04857 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.76□□□□□ -1.49
Col6a1Q04857 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col6a1Q04857 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC5.76□□□□□ -1.49
Col6a1Q04857 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a1Q04857 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.76□□□□□ -1.49
Col6a1Q04857 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a1Q04857 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm22266-201ENSMUST00000104011 138 ntBASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm11699-201ENSMUST00000119016 401 ntBASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm12340-201ENSMUST00000121617 462 ntBASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm25784-201ENSMUST00000122524 81 ntBASIC5.76□□□□□ -1.49
Col6a1Q04857 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm23047-201ENSMUST00000177661 94 ntBASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col6a1Q04857 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col6a1Q04857 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm27834-201ENSMUST00000183427 125 ntBASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm27796-201ENSMUST00000183863 261 ntBASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm28629-201ENSMUST00000187309 263 ntBASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm28769-201ENSMUST00000190176 615 ntBASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm29524-201ENSMUST00000190819 699 ntBASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm19761-201ENSMUST00000205372 391 ntBASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm44757-201ENSMUST00000206373 157 ntBASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm45048-201ENSMUST00000207058 429 ntBASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm17890-201ENSMUST00000221419 757 ntBASIC5.76□□□□□ -1.49
Col6a1Q04857 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col6a1Q04857 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col6a1Q04857 Gm24037-201ENSMUST00000082871 180 ntBASIC5.76□□□□□ -1.49
Col6a1Q04857 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
Col6a1Q04857 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a1Q04857 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a1Q04857 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col6a1Q04857 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Col6a1Q04857 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a1Q04857 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a1Q04857 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a1Q04857 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms