Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 Gm5558-201ENSMUST00000178933 495 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Gm26746-201ENSMUST00000181722 487 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Gm20923-201ENSMUST00000190009 319 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Gm37492-201ENSMUST00000191948 376 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Trav5d-2-201ENSMUST00000196107 275 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Trav5n-2-201ENSMUST00000197136 275 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC5.55□□□□□ -1.52
Sox1P53783 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Gm19252-201ENSMUST00000204705 305 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC5.55□□□□□ -1.52
Sox1P53783 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.55□□□□□ -1.52
Sox1P53783 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox1P53783 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC5.55□□□□□ -1.52
Sox1P53783 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 AC158641.1-201ENSMUST00000218933 229 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.55□□□□□ -1.52
Sox1P53783 CT485612.2-201ENSMUST00000223014 151 ntBASIC5.55□□□□□ -1.52
Sox1P53783 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.55□□□□□ -1.52
Sox1P53783 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.55□□□□□ -1.52
Sox1P53783 AC155237.2-201ENSMUST00000228487 478 ntBASIC5.55□□□□□ -1.52
Sox1P53783 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 Olfr881-201ENSMUST00000074611 948 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Gm22423-201ENSMUST00000082861 184 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Gm22829-201ENSMUST00000083771 106 ntBASIC5.55□□□□□ -1.52
Sox1P53783 AC125532.1-201ENSMUST00000216210 2334 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sox1P53783 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sox1P53783 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Sox1P53783 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox1P53783 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.55□□□□□ -1.52
Sox1P53783 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox1P53783 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sox1P53783 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Sox1P53783 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox1P53783 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Sox1P53783 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox1P53783 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox1P53783 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox1P53783 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox1P53783 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox1P53783 Gm23744-201ENSMUST00000104231 149 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm25564-201ENSMUST00000104604 132 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm14874-201ENSMUST00000118995 438 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm14428-201ENSMUST00000120408 822 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm12094-201ENSMUST00000121781 472 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm15167-201ENSMUST00000121997 187 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm22613-201ENSMUST00000122679 292 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm23906-201ENSMUST00000157573 128 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm24729-201ENSMUST00000158225 137 ntBASIC5.54□□□□□ -1.52
Sox1P53783 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox1P53783 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm22650-201ENSMUST00000175138 105 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.54□□□□□ -1.52
Sox1P53783 Gm8941-201ENSMUST00000181451 899 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm27158-201ENSMUST00000183813 238 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Mir6382-201ENSMUST00000184055 110 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm21856-201ENSMUST00000187547 696 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm9775-201ENSMUST00000189402 331 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm37445-201ENSMUST00000195318 242 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm43604-201ENSMUST00000199799 705 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox1P53783 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sox1P53783 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox1P53783 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox1P53783 AC125531.1-201ENSMUST00000219849 221 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm5045-201ENSMUST00000027054 810 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox1P53783 Gm5321-201ENSMUST00000072050 447 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Sox1P53783 Snord22-201ENSMUST00000083153 126 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Sox1P53783 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox1P53783 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox1P53783 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sox1P53783 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox1P53783 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Sox1P53783 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.54□□□□□ -1.52
Sox1P53783 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox1P53783 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.54□□□□□ -1.52
Sox1P53783 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sox1P53783 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sox1P53783 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.53□□□□□ -1.52
Sox1P53783 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms