Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm15745-201ENSMUST00000119807 115 ntBASIC5□□□□□ -1.61
Shmt1P50431 Gm14534-201ENSMUST00000120045 357 ntBASIC5□□□□□ -1.61
Shmt1P50431 Gm11904-201ENSMUST00000120562 248 ntBASIC5□□□□□ -1.61
Shmt1P50431 Gm13745-201ENSMUST00000121994 527 ntBASIC5□□□□□ -1.61
Shmt1P50431 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5□□□□□ -1.61
Shmt1P50431 Mup-ps2-201ENSMUST00000142602 533 ntBASIC5□□□□□ -1.61
Shmt1P50431 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5□□□□□ -1.61
Shmt1P50431 Gm24113-201ENSMUST00000157477 276 ntBASIC5□□□□□ -1.61
Shmt1P50431 Gm26402-201ENSMUST00000158499 113 ntBASIC5□□□□□ -1.61
Shmt1P50431 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC5□□□□□ -1.61
Shmt1P50431 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5□□□□□ -1.61
Shmt1P50431 Gm22166-201ENSMUST00000178419 121 ntBASIC5□□□□□ -1.61
Shmt1P50431 Gm23288-201ENSMUST00000179213 121 ntBASIC5□□□□□ -1.61
Shmt1P50431 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC5□□□□□ -1.61
Shmt1P50431 Gm27313-201ENSMUST00000183500 142 ntBASIC5□□□□□ -1.61
Shmt1P50431 Mir1957b-201ENSMUST00000184608 123 ntBASIC5□□□□□ -1.61
Shmt1P50431 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5□□□□□ -1.61
Shmt1P50431 Gm8392-201ENSMUST00000185647 835 ntBASIC5□□□□□ -1.61
Shmt1P50431 Gm28389-201ENSMUST00000190090 697 ntBASIC5□□□□□ -1.61
Shmt1P50431 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC5□□□□□ -1.61
Shmt1P50431 Gm43144-201ENSMUST00000198256 485 ntBASIC5□□□□□ -1.61
Shmt1P50431 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5□□□□□ -1.61
Shmt1P50431 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC5□□□□□ -1.61
Shmt1P50431 Gm10264-201ENSMUST00000220589 429 ntBASIC5□□□□□ -1.61
Shmt1P50431 AC122465.3-201ENSMUST00000221644 355 ntBASIC5□□□□□ -1.61
Shmt1P50431 AC174797.3-202ENSMUST00000224578 587 ntBASIC5□□□□□ -1.61
Shmt1P50431 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC5□□□□□ -1.61
Shmt1P50431 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Shmt1P50431 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Shmt1P50431 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5□□□□□ -1.61
Shmt1P50431 Gm44678-201ENSMUST00000207828 2775 ntBASIC5□□□□□ -1.61
Shmt1P50431 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5□□□□□ -1.61
Shmt1P50431 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Shmt1P50431 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Shmt1P50431 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Shmt1P50431 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5□□□□□ -1.61
Shmt1P50431 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC5□□□□□ -1.61
Shmt1P50431 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
Shmt1P50431 Gm44027-201ENSMUST00000203419 3480 ntBASIC5□□□□□ -1.61
Shmt1P50431 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5□□□□□ -1.61
Shmt1P50431 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Shmt1P50431 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Shmt1P50431 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Shmt1P50431 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
Shmt1P50431 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Shmt1P50431 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Shmt1P50431 Gm23014-201ENSMUST00000104144 130 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm23594-201ENSMUST00000104307 134 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Shmt1P50431 Gm13733-201ENSMUST00000117290 535 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm12386-201ENSMUST00000117380 688 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm13349-201ENSMUST00000118436 411 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm14793-201ENSMUST00000118739 311 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm14307-201ENSMUST00000118930 291 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm14901-201ENSMUST00000119001 283 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm15113-201ENSMUST00000119280 836 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm13170-201ENSMUST00000119716 643 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm12294-201ENSMUST00000119723 490 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm24635-201ENSMUST00000122712 128 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.99□□□□□ -1.61
Shmt1P50431 Gm14297-201ENSMUST00000129110 291 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Shmt1P50431 Gm23964-201ENSMUST00000157966 107 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm25605-201ENSMUST00000158364 124 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Shmt1P50431 Cfap61-214ENSMUST00000167179 183 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm22646-201ENSMUST00000175130 115 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm23568-201ENSMUST00000177960 92 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm24829-201ENSMUST00000179245 92 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm25942-201ENSMUST00000180080 110 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm21856-201ENSMUST00000187547 696 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Shmt1P50431 Gm21735-201ENSMUST00000190360 696 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.99□□□□□ -1.61
Shmt1P50431 Gm36998-201ENSMUST00000193205 704 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.99□□□□□ -1.61
Shmt1P50431 Gm36985-201ENSMUST00000195595 379 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC4.99□□□□□ -1.61
Shmt1P50431 Gm19089-201ENSMUST00000197207 613 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Shmt1P50431 Gm43892-201ENSMUST00000204373 265 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.99□□□□□ -1.61
Shmt1P50431 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Shmt1P50431 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Shmt1P50431 CT030135.1-201ENSMUST00000223760 570 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Shmt1P50431 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Shmt1P50431 Gm22810-201ENSMUST00000082741 158 ntBASIC4.99□□□□□ -1.61
Shmt1P50431 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.99□□□□□ -1.61
Shmt1P50431 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.99□□□□□ -1.61
Shmt1P50431 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Shmt1P50431 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Shmt1P50431 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Shmt1P50431 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Shmt1P50431 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Shmt1P50431 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Shmt1P50431 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 132.9 ms