Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm26247-201ENSMUST00000116702 91 ntBASIC3.48□□□□□ -1.85
HttP42859 Gm20162-201ENSMUST00000193629 871 ntBASIC3.48□□□□□ -1.85
HttP42859 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.48□□□□□ -1.85
HttP42859 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HttP42859 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
HttP42859 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.48□□□□□ -1.85
HttP42859 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HttP42859 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HttP42859 Gm23911-201ENSMUST00000104596 134 ntBASIC3.48□□□□□ -1.85
HttP42859 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HttP42859 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HttP42859 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HttP42859 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
HttP42859 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC3.47□□□□□ -1.85
HttP42859 Gm2987-201ENSMUST00000187673 1693 ntBASIC3.47□□□□□ -1.85
HttP42859 Gm22782-201ENSMUST00000104082 132 ntBASIC3.47□□□□□ -1.85
HttP42859 Gm23011-201ENSMUST00000104148 132 ntBASIC3.47□□□□□ -1.85
HttP42859 Gm12222-201ENSMUST00000121368 260 ntBASIC3.47□□□□□ -1.85
HttP42859 Gm25808-201ENSMUST00000122784 284 ntBASIC3.47□□□□□ -1.85
HttP42859 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HttP42859 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC3.47□□□□□ -1.85
HttP42859 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HttP42859 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.47□□□□□ -1.85
HttP42859 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.47□□□□□ -1.85
HttP42859 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
HttP42859 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HttP42859 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.47□□□□□ -1.85
HttP42859 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HttP42859 Mir6413-201ENSMUST00000184049 108 ntBASIC3.47□□□□□ -1.85
HttP42859 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC3.47□□□□□ -1.85
HttP42859 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
HttP42859 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HttP42859 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.46□□□□□ -1.85
HttP42859 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.85
HttP42859 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HttP42859 Gm24274-201ENSMUST00000116787 124 ntBASIC3.46□□□□□ -1.86
HttP42859 Gm12261-201ENSMUST00000117499 645 ntBASIC3.46□□□□□ -1.86
HttP42859 Gm23867-201ENSMUST00000122649 274 ntBASIC3.46□□□□□ -1.86
HttP42859 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
HttP42859 Gm45710-201ENSMUST00000212847 215 ntBASIC3.46□□□□□ -1.86
HttP42859 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
HttP42859 Gm3123-201ENSMUST00000163480 480 ntBASIC3.46□□□□□ -1.86
HttP42859 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC3.46□□□□□ -1.86
HttP42859 Olfr192-201ENSMUST00000080251 925 ntBASIC3.46□□□□□ -1.86
HttP42859 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
HttP42859 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
HttP42859 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
HttP42859 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HttP42859 Gm14402-201ENSMUST00000122217 508 ntBASIC3.45□□□□□ -1.86
HttP42859 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HttP42859 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HttP42859 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HttP42859 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HttP42859 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HttP42859 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HttP42859 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HttP42859 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.45□□□□□ -1.86
HttP42859 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.45□□□□□ -1.86
HttP42859 Gm13717-201ENSMUST00000119868 365 ntBASIC3.45□□□□□ -1.86
HttP42859 Mir3076-201ENSMUST00000175415 60 ntBASIC3.45□□□□□ -1.86
HttP42859 Gm18843-201ENSMUST00000194982 719 ntBASIC3.45□□□□□ -1.86
HttP42859 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HttP42859 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.45□□□□□ -1.86
HttP42859 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HttP42859 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
HttP42859 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
HttP42859 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.45□□□□□ -1.86
HttP42859 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HttP42859 Gm43319-201ENSMUST00000198036 2270 ntBASIC3.44□□□□□ -1.86
HttP42859 Gm14816-201ENSMUST00000117174 294 ntBASIC3.44□□□□□ -1.86
HttP42859 Gm22666-201ENSMUST00000158717 164 ntBASIC3.44□□□□□ -1.86
HttP42859 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HttP42859 Gm4761-201ENSMUST00000178086 582 ntBASIC3.44□□□□□ -1.86
HttP42859 Gm28030-201ENSMUST00000184987 138 ntBASIC3.44□□□□□ -1.86
HttP42859 Gm44490-201ENSMUST00000198566 127 ntBASIC3.44□□□□□ -1.86
HttP42859 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HttP42859 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.44□□□□□ -1.86
HttP42859 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HttP42859 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HttP42859 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HttP42859 Gm37329-201ENSMUST00000192973 2057 ntBASIC3.44□□□□□ -1.86
HttP42859 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HttP42859 Gm43210-201ENSMUST00000196743 6152 ntBASIC3.44□□□□□ -1.86
HttP42859 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HttP42859 Mir344c-201ENSMUST00000103919 92 ntBASIC3.44□□□□□ -1.86
HttP42859 Gm23671-201ENSMUST00000157472 103 ntBASIC3.44□□□□□ -1.86
HttP42859 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.44□□□□□ -1.86
HttP42859 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HttP42859 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HttP42859 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HttP42859 Gm9251-201ENSMUST00000197202 628 ntBASIC3.44□□□□□ -1.86
HttP42859 Gm18000-201ENSMUST00000212153 800 ntBASIC3.44□□□□□ -1.86
HttP42859 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.44□□□□□ -1.86
HttP42859 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
HttP42859 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
HttP42859 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
HttP42859 Gm43845-201ENSMUST00000202462 1820 ntBASIC3.43□□□□□ -1.86
HttP42859 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HttP42859 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HttP42859 Mir466k-201ENSMUST00000116774 122 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms