Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm8940-201ENSMUST00000212585 219 ntBASIC5.43□□□□□ -1.54
Hoxd9P28357 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.43□□□□□ -1.54
Hoxd9P28357 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.43□□□□□ -1.54
Hoxd9P28357 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.43□□□□□ -1.54
Hoxd9P28357 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC5.43□□□□□ -1.54
Hoxd9P28357 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.43□□□□□ -1.54
Hoxd9P28357 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.43□□□□□ -1.54
Hoxd9P28357 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd9P28357 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Hoxd9P28357 Gm22740-201ENSMUST00000083439 109 ntBASIC5.43□□□□□ -1.54
Hoxd9P28357 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd9P28357 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd9P28357 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd9P28357 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.43□□□□□ -1.54
Hoxd9P28357 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd9P28357 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd9P28357 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.43□□□□□ -1.54
Hoxd9P28357 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.43□□□□□ -1.54
Hoxd9P28357 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd9P28357 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
Hoxd9P28357 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd9P28357 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd9P28357 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd9P28357 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd9P28357 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd9P28357 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm15660-201ENSMUST00000118997 478 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm14577-201ENSMUST00000121134 256 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd9P28357 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm25920-201ENSMUST00000158307 99 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm16569-201ENSMUST00000160526 314 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd9P28357 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm21842-201ENSMUST00000177552 498 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm21626-201ENSMUST00000177791 498 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm21562-201ENSMUST00000177888 498 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm21539-201ENSMUST00000177925 498 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm21599-201ENSMUST00000178249 498 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm21914-201ENSMUST00000178452 498 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm21723-201ENSMUST00000178692 498 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm21916-201ENSMUST00000178771 498 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm21801-201ENSMUST00000178865 498 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm21633-201ENSMUST00000178941 498 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm21821-201ENSMUST00000179646 498 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm21588-201ENSMUST00000180074 498 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm21780-201ENSMUST00000180128 498 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm21572-201ENSMUST00000180134 498 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm21529-201ENSMUST00000180175 498 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm23523-201ENSMUST00000180190 107 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm27521-201ENSMUST00000184022 64 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm27747-201ENSMUST00000184707 85 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm29397-201ENSMUST00000185205 333 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm29062-201ENSMUST00000186032 694 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm28255-201ENSMUST00000187101 694 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm29370-202ENSMUST00000187476 499 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm8419-201ENSMUST00000189886 412 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm32033-201ENSMUST00000193483 339 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm19131-201ENSMUST00000203408 789 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm29781-201ENSMUST00000203862 478 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm18791-201ENSMUST00000204611 726 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm44157-201ENSMUST00000204720 410 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm45750-201ENSMUST00000211966 354 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 CT485612.4-201ENSMUST00000223405 250 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 AC144819.1-201ENSMUST00000227015 620 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 AC098719.1-201ENSMUST00000228920 371 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd9P28357 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd9P28357 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Gm37970-201ENSMUST00000193865 1732 ntBASIC5.42□□□□□ -1.54
Hoxd9P28357 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd9P28357 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd9P28357 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.42□□□□□ -1.54
Hoxd9P28357 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms